RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 UNC80Q8N2C7 3258 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 COL4A6Q14031 1691 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.37■□□□□ 0.37
SNX6-205ENST00000555648 GRM6O15303 877 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 PFKFB2O60825 505 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 PSMD10O75832 226 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 ZSCAN20P17040 1043 aaPredicted RBP17.37■□□□□ 0.37
SNX6-205ENST00000555648 DNM2P50570 870 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 TMEM40Q8WWA1 233 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 GJA10Q969M2 543 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 BRMS1Q9HCU9 246 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 RGS18Q9NS28 235 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 ORC3Q9UBD5 711 aaPredicted RBP17.37■□□□□ 0.37
SNX6-205ENST00000555648 TPCN1Q9ULQ1 816 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 STK36Q9NRP7 1315 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 CHD9Q3L8U1 2897 aa17.37■□□□□ 0.37
SNX6-205ENST00000555648 TBKBP1A7MCY6 615 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 ZNF862O60290 1169 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 GPR32O75388 356 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 MTERF2Q49AM1 385 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 XKR3Q5GH77 459 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 PTCRAQ6ISU1 281 aaPredicted RBP17.36■□□□□ 0.37
SNX6-205ENST00000555648 NEK8Q86SG6 692 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 FAM228AQ86W67 206 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 NLRP7Q8WX94 980 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 P2RX5Q93086 422 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 PABPC5Q96DU9 382 aaKnown RBP17.36■□□□□ 0.37
SNX6-205ENST00000555648 ALG13Q9NP73 1137 aaKnown RBP17.36■□□□□ 0.37
SNX6-205ENST00000555648 CLDND1Q9NY35 253 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 PCDHB12Q9Y5F1 795 aa17.36■□□□□ 0.37
SNX6-205ENST00000555648 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
SNX6-205ENST00000555648 TTC28Q96AY4 2481 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 M0R2N6 131 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 EDIL3O43854 480 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 MGEA5O60502 916 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 DKC1O60832 514 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNX6-205ENST00000555648 MMP1P03956 469 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 GCFC2P16383 781 aaKnown RBP17.35■□□□□ 0.37
SNX6-205ENST00000555648 EIF4BP23588 611 aaKnown RBP17.35■□□□□ 0.37
SNX6-205ENST00000555648 CDC42EP1Q00587 391 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 UGCGQ16739 394 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 PHF20Q9BVI0 1012 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 PLAGL2Q9UPG8 496 aa17.35■□□□□ 0.37
SNX6-205ENST00000555648 H3BQ06 376 aaPredicted RBP17.34■□□□□ 0.37
SNX6-205ENST00000555648 HOXA2O43364 376 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 CCNT1O60563 726 aaKnown RBP17.34■□□□□ 0.37
SNX6-205ENST00000555648 SIP14410 1827 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 SSTR3P32745 418 aaPredicted RBP17.34■□□□□ 0.37
SNX6-205ENST00000555648 GATMP50440 423 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 AK2P54819 239 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 PSMC5P62195 406 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 PIK3AP1Q6ZUJ8 805 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 ABI1Q8IZP0 508 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 CRIPAKQ8N1N5 446 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 KLHL23Q8NBE8 558 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 MICAL1Q8TDZ2 1067 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 ZNF668Q96K58 619 aaPredicted RBP17.34■□□□□ 0.37
SNX6-205ENST00000555648 FAM20AQ96MK3 541 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 MBOAT7Q96N66 472 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 JPH2Q9BR39 696 aaPredicted RBP17.34■□□□□ 0.37
SNX6-205ENST00000555648 GCOM2Q9BZD3 368 aaPredicted RBP17.34■□□□□ 0.37
SNX6-205ENST00000555648 IGFLR1Q9H665 355 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 TMEM161AQ9NX61 479 aa17.34■□□□□ 0.37
SNX6-205ENST00000555648 C9IYK1 514 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
SNX6-205ENST00000555648 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
SNX6-205ENST00000555648 LINC00271P0C7V0 271 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 KRT2P35908 639 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 GPC3P51654 580 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 TRIM29Q14134 588 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 NPY5RQ15761 445 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 FAM102BQ5T8I3 360 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 PPP4R3AQ6IN85 833 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.33■□□□□ 0.36
SNX6-205ENST00000555648 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
SNX6-205ENST00000555648 ADAMTS10Q9H324 1103 aa17.33■□□□□ 0.36
SNX6-205ENST00000555648 ELAC1Q9H777 363 aaKnown RBP17.33■□□□□ 0.36
SNX6-205ENST00000555648 EYSQ5T1H1 3165 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 SLC37A4O43826 429 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 ITGB1P05556 798 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 DARSP14868 501 aaKnown RBP17.32■□□□□ 0.36
SNX6-205ENST00000555648 NEK4P51957 841 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 THNSL1Q8IYQ7 743 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 LINC01465Q8N7H1 131 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 NECAB1Q8N987 351 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 RNF169Q8NCN4 708 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 NEK9Q8TD19 979 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 POF1BQ8WVV4 589 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
SNX6-205ENST00000555648 PRUNE2Q8WUY3 3088 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 GRXCR2A6NFK2 248 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 FGFR1P11362 822 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 IL9P15248 144 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 LAG3P18627 525 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms