RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 CFHR1Q03591 330 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 RSPO2Q6UXX9 243 aaPredicted RBP13.39□□□□□ -0.27
ABCD4-222ENST00000555617 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 RNF207Q6ZRF8 634 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 KCTD1Q719H9 257 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 TMEM173Q86WV6 379 aaPredicted RBP13.39□□□□□ -0.27
ABCD4-222ENST00000555617 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 TUT1Q9H6E5 874 aaKnown RBP13.39□□□□□ -0.27
ABCD4-222ENST00000555617 RNF19AQ9NV58 838 aa13.39□□□□□ -0.27
ABCD4-222ENST00000555617 POLQO75417 2590 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 MUC22E2RYF6 1773 aaPredicted RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 SARSP49591 514 aaKnown RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 FAM193AP78312 1265 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 ARHGAP4P98171 946 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 IKQ13123 557 aaPredicted RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 LAMC2Q13753 1193 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 MYSM1Q5VVJ2 828 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 DAB2IPQ5VWQ8 1189 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 GET4Q7L5D6 327 aaPredicted RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 LONP2Q86WA8 852 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 TRIM50Q86XT4 487 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 MKL1Q969V6 931 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 CEP95Q96GE4 821 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 PADI3Q9ULW8 664 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 NDRG2Q9UN36 371 aaKnown RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 TELO2Q9Y4R8 837 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 UTP20O75691 2785 aaKnown RBP13.38□□□□□ -0.27
ABCD4-222ENST00000555617 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
ABCD4-222ENST00000555617 IGSF3O75054 1194 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 MAFO75444 373 aaPredicted RBP13.37□□□□□ -0.27
ABCD4-222ENST00000555617 LGALS2P05162 132 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 CNR2P34972 360 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
ABCD4-222ENST00000555617 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
ABCD4-222ENST00000555617 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 DNERQ8NFT8 737 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 COL20A1Q9P218 1284 aa13.37□□□□□ -0.27
ABCD4-222ENST00000555617 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 LILRB3O75022 631 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 RFPL2O75678 378 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
ABCD4-222ENST00000555617 CCR3P51677 355 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 CLCN4P51793 760 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 PIP4K2CQ8TBX8 421 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 DNAJB3Q8WWF6 145 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 ZNF707Q96C28 371 aaPredicted RBP13.36□□□□□ -0.27
ABCD4-222ENST00000555617 LOXL4Q96JB6 756 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 ZNF558Q96NG5 402 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
ABCD4-222ENST00000555617 A0A087WV48 116 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 TCRBV5S4A2TA0A5A2 114 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 POU3F2P20265 443 aaPredicted RBP13.35□□□□□ -0.27
ABCD4-222ENST00000555617 MCCP23508 829 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 SP2Q02086 613 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 KRT17Q04695 432 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 TMEM266Q2M3C6 531 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 VPS52Q8N1B4 723 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 BCL7CQ8WUZ0 217 aaPredicted RBP13.35□□□□□ -0.27
ABCD4-222ENST00000555617 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
ABCD4-222ENST00000555617 CASD1Q96PB1 797 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 FTHL17Q9BXU8 183 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 SEMA4CQ9C0C4 833 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 RANBP17Q9H2T7 1088 aaKnown RBP13.35□□□□□ -0.27
ABCD4-222ENST00000555617 VPS45Q9NRW7 570 aa13.35□□□□□ -0.27
ABCD4-222ENST00000555617 SETD2Q9BYW2 2564 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-222ENST00000555617 CCDC195A0A1B0GUA6 201 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 ENO4A6NNW6 628 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 NCAM2O15394 837 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 PDE6AP16499 860 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 CXCL12P48061 93 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-222ENST00000555617 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.272e-6■■■■■ 39.1
ABCD4-222ENST00000555617 TAAR1Q96RJ0 339 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 NELL2Q99435 816 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 VN1R3Q9BXE9 311 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 PRORYQ9H606 182 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 MTMR4Q9NYA4 1195 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
ABCD4-222ENST00000555617 ITPR2Q14571 2701 aa13.33□□□□□ -0.28
ABCD4-222ENST00000555617 ITPKBP27987 946 aa13.33□□□□□ -0.28
ABCD4-222ENST00000555617 PPM1AP35813 382 aa13.33□□□□□ -0.28
ABCD4-222ENST00000555617 UAP1L1Q3KQV9 507 aa13.33□□□□□ -0.28
ABCD4-222ENST00000555617 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
ABCD4-222ENST00000555617 CCDC158Q5M9N0 1113 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms