RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 U2AF2P26368 475 aaKnown RBP eCLIP21.07■□□□□ 0.96
HDAC4-217ENST00000553145 HTRA4P83105 476 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-217ENST00000553145 CYP4A11Q02928 519 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 PAK2Q13177 524 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 GNL2Q13823 731 aaKnown RBP21.07■□□□□ 0.96
HDAC4-217ENST00000553145 ADGRE1Q14246 886 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 CTTNQ14247 550 aaKnown RBP21.07■□□□□ 0.96
HDAC4-217ENST00000553145 NBR1Q14596 966 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 ZNF174Q15697 407 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 RTN4RL1Q86UN2 441 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-217ENST00000553145 ZNF579Q8NAF0 562 aaKnown RBP21.07■□□□□ 0.96
HDAC4-217ENST00000553145 SUGCTQ9HAC7 445 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 AKT3Q9Y243 479 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 IGKV6-21A0A0C4DH24 114 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 UPP2O95045 317 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 CRYBB1P53674 252 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-217ENST00000553145 NPEPPSP55786 919 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 TTC38Q5R3I4 469 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 ZNF668Q96K58 619 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-217ENST00000553145 MAP7D2Q96T17 732 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 ADAMTS10Q9H324 1103 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 TMX1Q9H3N1 280 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 ERVK-5Q9HDB9 667 aa21.06■□□□□ 0.96
HDAC4-217ENST00000553145 LINC01553A4QN01 128 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 POTEMA6NI47 508 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 RFXAPO00287 272 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 MGEA5O60502 916 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 TMOD1P28289 359 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 NLRP11P59045 1033 aaKnown RBP21.05■□□□□ 0.96
HDAC4-217ENST00000553145 C4orf19Q8IY42 314 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 SP7Q8TDD2 431 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-217ENST00000553145 GAS2L1Q99501 681 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-217ENST00000553145 EIF2AK1Q9BQI3 630 aaKnown RBP21.05■□□□□ 0.96
HDAC4-217ENST00000553145 CYP26B1Q9NR63 512 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 KIF3AQ9Y496 699 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 INSL6Q9Y581 213 aa21.05■□□□□ 0.96
HDAC4-217ENST00000553145 ZBTB39O15060 712 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 DKC1O60832 514 aaKnown RBP eCLIP21.04■□□□□ 0.96
HDAC4-217ENST00000553145 MAFO75444 373 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-217ENST00000553145 RPS6KA5O75582 802 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 SLITRK3O94933 977 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 TOB1P50616 345 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-217ENST00000553145 GPC3P51654 580 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 NFX1Q12986 1120 aaKnown RBP21.04■□□□□ 0.96
HDAC4-217ENST00000553145 FAM228AQ86W67 206 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 MAFAQ8NHW3 353 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-217ENST00000553145 ARNTL2Q8WYA1 636 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 HSD17B14Q9BPX1 270 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 ZSWIM4Q9H7M6 989 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 SMC3Q9UQE7 1217 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 COL4A6Q14031 1691 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 CHD7Q9P2D1 2997 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 COL6A3P12111 3177 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 ARID2Q68CP9 1835 aa21.04■□□□□ 0.96
HDAC4-217ENST00000553145 COL4A4P53420 1690 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-217ENST00000553145 OR52Z1P0C646 297 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 YWHABP31946 246 aaKnown RBP21.03■□□□□ 0.96
HDAC4-217ENST00000553145 TRAPPC10P48553 1259 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 ORC2Q13416 577 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-217ENST00000553145 TPH2Q8IWU9 490 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 CEP170P1Q96L14 293 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 YME1L1Q96TA2 773 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 FTHL17Q9BXU8 183 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 TSPYL2Q9H2G4 693 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-217ENST00000553145 NOL7Q9UMY1 257 aaKnown RBP21.03■□□□□ 0.96
HDAC4-217ENST00000553145 ST3GAL5Q9UNP4 418 aa21.03■□□□□ 0.96
HDAC4-217ENST00000553145 CUL4AQ13619 759 aa21.02■□□□□ 0.96
HDAC4-217ENST00000553145 CRIPAKQ8N1N5 446 aa21.02■□□□□ 0.96
HDAC4-217ENST00000553145 C4orf32Q8N8J7 132 aa21.02■□□□□ 0.96
HDAC4-217ENST00000553145 NEK9Q8TD19 979 aa21.02■□□□□ 0.96
HDAC4-217ENST00000553145 RC3H2Q9HBD1 1191 aaKnown RBP21.02■□□□□ 0.96
HDAC4-217ENST00000553145 PCDHB6Q9Y5E3 794 aa21.02■□□□□ 0.96
HDAC4-217ENST00000553145 TTC3P53804 2025 aa21.01■□□□□ 0.95
HDAC4-217ENST00000553145 IGFBP4P22692 258 aa21.01■□□□□ 0.95
HDAC4-217ENST00000553145 TECP42680 631 aa21.01■□□□□ 0.95
HDAC4-217ENST00000553145 ERVK-21P61565 698 aa21.01■□□□□ 0.95
HDAC4-217ENST00000553145 MCTP1Q6DN14 999 aa21.01■□□□□ 0.95
HDAC4-217ENST00000553145 DHX33Q9H6R0 707 aaKnown RBP21.01■□□□□ 0.95
HDAC4-217ENST00000553145 BMP2KQ9NSY1 1161 aaPredicted RBP21.01■□□□□ 0.95
HDAC4-217ENST00000553145 MTUS1Q9ULD2 1270 aa21.01■□□□□ 0.95
HDAC4-217ENST00000553145 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.01■□□□□ 0.95
HDAC4-217ENST00000553145 GPR182O15218 404 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 LYPLA2O95372 231 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 SPATA31C1P0DKV0 1188 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 FGFR4P22455 802 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 EIF4BP23588 611 aaKnown RBP21■□□□□ 0.95
HDAC4-217ENST00000553145 XKR9Q5GH70 373 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 NLRP7Q8WX94 980 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 TGS1Q96RS0 853 aaKnown RBP21■□□□□ 0.95
HDAC4-217ENST00000553145 C17orf80Q9BSJ5 609 aa21■□□□□ 0.95
HDAC4-217ENST00000553145 SUCLA2Q9P2R7 463 aaPredicted RBP21■□□□□ 0.95
HDAC4-217ENST00000553145 MYO9BQ13459 2157 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 A0A087WWV3 80 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 A0A087WZ62 844 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 H3BQV1 296 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 LPXNO60711 386 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 DARSP14868 501 aaKnown RBP20.99■□□□□ 0.95
HDAC4-217ENST00000553145 RFC5P40937 340 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 DNM2P50570 870 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 POLGP54098 1239 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms