RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CABP7Q86V35 215 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 ZZZ3Q8IYH5 903 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 EXOC8Q8IYI6 725 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 NLGN2Q8NFZ4 835 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PLEKHO2Q8TD55 490 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.79□□□□□ -1.32
CPSF6-206ENST00000550987 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 RPS6KC1Q96S38 1066 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 CD244Q9BZW8 370 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 ZDHHC5Q9C0B5 715 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 CARS2Q9HA77 564 aaKnown RBP6.79□□□□□ -1.32
CPSF6-206ENST00000550987 ARNT2Q9HBZ2 717 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 SLAMF8Q9P0V8 285 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PNMA8BQ9ULN7 279 aaPredicted RBP6.79□□□□□ -1.32
CPSF6-206ENST00000550987 TAF6LQ9Y6J9 622 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 SLIT1O75093 1534 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PRAG1Q86YV5 1406 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 VSTM5A8MXK1 200 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 LTFP02788 710 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 HSPA8P11142 646 aaKnown RBP6.78□□□□□ -1.32
CPSF6-206ENST00000550987 TACR1P25103 407 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 KIR2DL1P43626 348 aaPredicted RBP6.78□□□□□ -1.32
CPSF6-206ENST00000550987 KIR2DL2P43627 348 aaPredicted RBP6.78□□□□□ -1.32
CPSF6-206ENST00000550987 LRRC32Q14392 662 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 ARHGAP29Q52LW3 1261 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 FIGNQ5HY92 759 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 GPR158Q5T848 1215 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 STEAP3Q658P3 488 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 SLC51AQ86UW1 340 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 CMIPQ8IY22 773 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 HSPBAP1Q96EW2 488 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 LRGUKQ96M69 825 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 ADAMTS10Q9H324 1103 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 TCF7L1Q9HCS4 588 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 NMRK2Q9NPI5 230 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 SRPK3Q9UPE1 567 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 ZNF281Q9Y2X9 895 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 SAMD9Q5K651 1589 aa6.78□□□□□ -1.32
CPSF6-206ENST00000550987 DVL2O14641 736 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 HGSO14964 777 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-206ENST00000550987 KDM1AO60341 852 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 CLASP2O75122 1294 aaKnown RBP6.77□□□□□ -1.33
CPSF6-206ENST00000550987 USP2O75604 605 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-206ENST00000550987 NTRK1P04629 796 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 H2AFB2P0C5Z0 115 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 PTX3P26022 381 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-206ENST00000550987 CORO7P57737 925 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 GTF2H3Q13889 308 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 DOC2BQ14184 412 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 BTBD8Q5XKL5 378 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 CC2D1AQ6P1N0 951 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-206ENST00000550987 GALNT18Q6P9A2 607 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 SLCO6A1Q86UG4 719 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 DGKHQ86XP1 1220 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 RIOX2Q8IUF8 465 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 NUP43Q8NFH3 380 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 TGFBRAP1Q8WUH2 860 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 LMBR1Q8WVP7 490 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 MTA3Q9BTC8 594 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 PRDM11Q9NQV5 511 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 PDLIM7Q9NR12 457 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 KCNH7Q9NS40 1196 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 RIC8BQ9NVN3 520 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 OBP2AQ9NY56 170 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 LMCD1Q9NZU5 365 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 IMPACTQ9P2X3 320 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 B3GALT1Q9Y5Z6 326 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 GOLGA3Q08378 1498 aa6.77□□□□□ -1.33
CPSF6-206ENST00000550987 SLC27A2O14975 620 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 H2AFYO75367 372 aaKnown RBP6.76□□□□□ -1.33
CPSF6-206ENST00000550987 PRKCAP17252 672 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 SOX10P56693 466 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 ZP2Q05996 745 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 BNIP3Q12983 259 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 ODF1Q14990 250 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 BICRALQ6AI39 1079 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 KCTD1Q719H9 257 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 NOSTRINQ8IVI9 506 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 RBM12BQ8IXT5 1001 aaKnown RBP6.76□□□□□ -1.33
CPSF6-206ENST00000550987 Q8N1Y9 231 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 UHMK1Q8TAS1 419 aaKnown RBP6.76□□□□□ -1.33
CPSF6-206ENST00000550987 SH3RF2Q8TEC5 729 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 ASIC4Q96FT7 647 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 ACAP3Q96P50 834 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 MPHOSPH6Q99547 160 aaKnown RBP6.76□□□□□ -1.33
CPSF6-206ENST00000550987 SPOCK3Q9BQ16 436 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 MS4A5Q9H3V2 200 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 SMOC1Q9H4F8 434 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 DNAJC28Q9NX36 388 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 MSRAQ9UJ68 235 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 ZBTB21Q9ULJ3 1066 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 RGPD3A6NKT7 1758 aaPredicted RBP6.76□□□□□ -1.33
CPSF6-206ENST00000550987 RGPD4Q7Z3J3 1758 aa6.76□□□□□ -1.33
CPSF6-206ENST00000550987 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms