RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 VPS41P49754 854 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 RAB27AP51159 221 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 CENPTQ96BT3 561 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 RMDN2Q96LZ7 410 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
VDR-208ENST00000550325 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 RAD21O60216 631 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 NR2F2P24468 414 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 TUBP50607 506 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 SEPT2Q15019 361 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 CNGA2Q16280 664 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 NBPF20Q3BBV1 942 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 SYCE1Q8N0S2 351 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 BLOC1S4Q9NUP1 217 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 CTNNAL1Q9UBT7 734 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 HDAC9Q9UKV0 1011 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 C2CD2Q9Y426 696 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 CETN3O15182 167 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 TDP2O95551 362 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 GH1P01241 217 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 RFC5P40937 340 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 CHRNDQ07001 517 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 GLYCTKQ8IVS8 523 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 CRNKL1Q9BZJ0 848 aaKnown RBP13.09□□□□□ -0.31
VDR-208ENST00000550325 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.31
VDR-208ENST00000550325 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 ARL2BPQ9Y2Y0 163 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 MYH7P12883 1935 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 LAD1O00515 517 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 AGTP01019 485 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 KCNJ1P48048 391 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 ZNF131P52739 623 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
VDR-208ENST00000550325 GALCP54803 685 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 TRAF1Q13077 416 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 LAMB3Q13751 1172 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 TSNAXIP1Q2TAA8 658 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
VDR-208ENST00000550325 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
VDR-208ENST00000550325 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
VDR-208ENST00000550325 RIC8AQ9NPQ8 531 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 UCHL3P15374 230 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
VDR-208ENST00000550325 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
VDR-208ENST00000550325 TRIP13Q15645 432 aaPredicted RBP13.08□□□□□ -0.31
VDR-208ENST00000550325 ZNF444Q8N0Y2 327 aaPredicted RBP13.08□□□□□ -0.31
VDR-208ENST00000550325 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.31
VDR-208ENST00000550325 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.31
VDR-208ENST00000550325 ERP27Q96DN0 273 aa13.08□□□□□ -0.31
VDR-208ENST00000550325 C8orf37Q96NL8 207 aa13.08□□□□□ -0.31
VDR-208ENST00000550325 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.31
VDR-208ENST00000550325 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.31
VDR-208ENST00000550325 MARF1Q9Y4F3 1742 aaKnown RBP13.08□□□□□ -0.32
VDR-208ENST00000550325 SLIT3O75094 1523 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.32
VDR-208ENST00000550325 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
VDR-208ENST00000550325 NKIRAS1Q9NYS0 192 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 FERP16591 822 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 SRRM1Q8IYB3 904 aaKnown RBP13.08□□□□□ -0.32
VDR-208ENST00000550325 REXO1Q8N1G1 1221 aaKnown RBP13.08□□□□□ -0.32
VDR-208ENST00000550325 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 SLC35G2Q8TBE7 412 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 RAD54LQ92698 747 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 PNMA5Q96PV4 448 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 TAOK3Q9H2K8 898 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 SAP30BPQ9UHR5 308 aaKnown RBP13.08□□□□□ -0.32
VDR-208ENST00000550325 ANAPC4Q9UJX5 808 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 INTUQ9ULD6 942 aa13.08□□□□□ -0.32
VDR-208ENST00000550325 A0A1B0GVG6 124 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 E9PMD0 336 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 MAP3K13O43283 966 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 CYTH3O43739 400 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 PYGLP06737 847 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 BRAFP15056 766 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 BNIP1Q12981 228 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 PGM2Q96G03 612 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms