RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 PXMP2Q9NR77 195 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 GJB4Q9NTQ9 266 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 MAP3K20Q9NYL2 800 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 FLRT1Q9NZU1 646 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 ADD3Q9UEY8 706 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 PCDHA4Q9UN74 947 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 KCNJ14Q9UNX9 436 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
PRKDC-211ENST00000546304 PTPN22Q9Y2R2 807 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 STARD13Q9Y3M8 1113 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 RPTORQ8N122 1335 aa7.23□□□□□ -1.25
PRKDC-211ENST00000546304 LOC102724159A0A0B4J2E5 919 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 ASB14A6NK59 587 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 ADCY3O60266 1144 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 MAP3K6O95382 1288 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 MMP1P03956 469 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 GRK4P32298 578 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 KRT2P35908 639 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 GUCY1B3Q02153 619 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 PWP2Q15269 919 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 ARHGEF16Q5VV41 709 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 JAKMIP3Q5VZ66 844 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 MFSD14CQ5VZR4 134 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 KRT40Q6A162 431 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 C16orf46Q6P387 395 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 MAMDC4Q6UXC1 1216 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 DIS3L2Q8IYB7 885 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 BLIDQ8IZY5 108 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 MSL3Q8N5Y2 521 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 IL31RAQ8NI17 732 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 RASGRP4Q8TDF6 673 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 NSUN6Q8TEA1 469 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 PGBD1Q96JS3 809 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 TINF2Q9BSI4 451 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 SUV39H2Q9H5I1 410 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 EHMT1Q9H9B1 1298 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 TMEM260Q9NX78 707 aa7.22□□□□□ -1.25
PRKDC-211ENST00000546304 NOP53Q9NZM5 478 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 DDX49Q9Y6V7 483 aaKnown RBP7.22□□□□□ -1.25
PRKDC-211ENST00000546304 WDR81Q562E7 1941 aa7.21□□□□□ -1.25
PRKDC-211ENST00000546304 B4DLN1 442 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 ADAMTS3O15072 1205 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 FOSP01100 380 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-211ENST00000546304 IGHA2P01877 340 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 CYBAP13498 195 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 PDCP20941 246 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 CCND2P30279 289 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 CYP2C19P33261 490 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 SREBF1P36956 1147 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 UBXN2AP68543 259 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 PGM5Q15124 567 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 SAFBQ15424 915 aaKnown RBP eCLIP7.21□□□□□ -1.26
PRKDC-211ENST00000546304 MAP3K21Q5TCX8 1036 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 MCTP2Q6DN12 878 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 KRT25Q7Z3Z0 450 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 FBXO16Q8IX29 292 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-211ENST00000546304 FBXO18Q8NFZ0 1043 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 MORC4Q8TE76 937 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 SH3TC2Q8TF17 1288 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 PNMA5Q96PV4 448 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 TAAR1Q96RJ0 339 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 IWS1Q96ST2 819 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 PDCD2LQ9BRP1 358 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 MCOLN1Q9GZU1 580 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 SAP130Q9H0E3 1048 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-211ENST00000546304 ZHX1Q9UKY1 873 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-211ENST00000546304 PCDHA6Q9UN73 950 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 CNPY2Q9Y2B0 182 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 PCDHA8Q9Y5H6 950 aa7.21□□□□□ -1.26
PRKDC-211ENST00000546304 CCDC194A0A1B0GVG4 234 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 VPS37CA5D8V6 355 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-211ENST00000546304 H3BQV1 296 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 TNFRSF10BO14763 440 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 SNAI1O95863 264 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-211ENST00000546304 ITGB2P05107 769 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 NFKB1P19838 968 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
PRKDC-211ENST00000546304 ARHGAP4P98171 946 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 GNL2Q13823 731 aaKnown RBP7.2□□□□□ -1.26
PRKDC-211ENST00000546304 NONOQ15233 471 aaKnown RBP eCLIP7.2□□□□□ -1.26
PRKDC-211ENST00000546304 PLA2G4EQ3MJ16 856 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 PCNX4Q63HM2 1172 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 XRRA1Q6P2D8 792 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 C20orf204Q6ZNR8 217 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 CAPN12Q6ZSI9 719 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 MICALL1Q8N3F8 863 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 ARMC5Q96C12 935 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 TRIM11Q96F44 468 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 ZNF333Q96JL9 665 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 KATNBL1Q9H079 304 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 ABHD16BQ9H3Z7 469 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 VTA1Q9NP79 307 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 NRBP1Q9UHY1 535 aa7.2□□□□□ -1.26
PRKDC-211ENST00000546304 KRBA1A5PL33 1030 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 BTBD18B2RXH4 712 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms