RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 ZIC2O95409 532 aaPredicted RBP10.67□□□□□ -0.7
CIT-216ENST00000544872 F2P00734 622 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 OR52Z1P0C646 297 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 ACTN1P12814 892 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 SIGLEC14Q08ET2 396 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 SEMA3FQ13275 785 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 PTGISQ16647 500 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 TMEM63BQ5T3F8 832 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 NCAPH2Q6IBW4 605 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 TNFRSF25Q93038 417 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 MBOAT7Q96N66 472 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 JPH2Q9BR39 696 aaPredicted RBP10.67□□□□□ -0.7
CIT-216ENST00000544872 TTC12Q9H892 705 aaPredicted RBP10.67□□□□□ -0.7
CIT-216ENST00000544872 TRIOO75962 3097 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 DNAH14Q0VDD8 3507 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 UMODL1Q5DID0 1318 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 M0QZ92 97 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 CTAGE5O15320 804 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 HBP1O60381 514 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 PARNO95453 639 aaKnown RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 P4HBP07237 508 aaKnown RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 HOXD8P13378 290 aaPredicted RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 TMOD1P28289 359 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 DNM2P50570 870 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 PSMC6P62333 389 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 PPFIA1Q13136 1202 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 ITGB3BPQ13352 177 aaPredicted RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 SF3A1Q15459 793 aaKnown RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 CLUL1Q15846 466 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 RSPO4Q2I0M5 234 aaPredicted RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 HAUS3Q68CZ6 603 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 ABHD15Q6UXT9 468 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 SESTD1Q86VW0 696 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 FAM126BQ8IXS8 530 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 DLL3Q9NYJ7 618 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 GABBR1Q9UBS5 961 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 CFAP45Q9UL16 551 aa10.66□□□□□ -0.7
CIT-216ENST00000544872 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
CIT-216ENST00000544872 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.7
CIT-216ENST00000544872 EMSYQ7Z589 1322 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 MAST4O15021 2626 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 GSTTP1A0A1W2PQM5 241 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 PSMD10O75832 226 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ATG7O95352 703 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 MARK3P27448 753 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 TECP42680 631 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
CIT-216ENST00000544872 CDK7P50613 346 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 PSMC5P62195 406 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 NUCB2P80303 420 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 PPP2R5CQ13362 524 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
CIT-216ENST00000544872 PDIA5Q14554 519 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 EPHA7Q15375 998 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ZNF484Q5JVG2 852 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 KIAA0319Q5VV43 1072 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 KRT79Q5XKE5 535 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ATL3Q6DD88 541 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 TAF2Q6P1X5 1199 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 DEFB128Q7Z7B8 93 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 HERC6Q8IVU3 1022 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 SLC43A3Q8NBI5 491 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 RASSF8Q8NHQ8 419 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ETNPPLQ8TBG4 499 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ATP8B4Q8TF62 1192 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
CIT-216ENST00000544872 CDK5RAP3Q96JB5 506 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 C16orf70Q9BSU1 422 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 ZSWIM4Q9H7M6 989 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 SUGCTQ9HAC7 445 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 KCNMB3Q9NPA1 279 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 CLDND1Q9NY35 253 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 GTF2IRD1Q9UHL9 959 aa10.65□□□□□ -0.7
CIT-216ENST00000544872 SMCHD1A6NHR9 2005 aa10.65□□□□□ -0.71
CIT-216ENST00000544872 PARP14Q460N5 1801 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 ADAMTS3O15072 1205 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 MAGEB2O15479 319 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 DHX15O43143 795 aaKnown RBP10.64□□□□□ -0.71
CIT-216ENST00000544872 SLC37A4O43826 429 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 LGR5O75473 907 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 SMIM10L2AP0DMW4 78 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 SMIM10L2BP0DMW5 78 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 ZSCAN22P10073 491 aaPredicted RBP10.64□□□□□ -0.71
CIT-216ENST00000544872 TXLNAP40222 546 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 PRPHP41219 470 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
CIT-216ENST00000544872 CDC42EP1Q00587 391 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 PTGDRQ13258 359 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 PTK7Q13308 1070 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
CIT-216ENST00000544872 XKR3Q5GH77 459 aa10.64□□□□□ -0.71
CIT-216ENST00000544872 EARS2Q5JPH6 523 aaKnown RBP10.64□□□□□ -0.71
CIT-216ENST00000544872 ARL6IP4Q66PJ3 421 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms