RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 P3H4Q92791 437 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 TRIM55Q9BYV6 548 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 UBE2Q2LH0YL09 131 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 RARBP10826 455 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 HPDP32754 393 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 GTF2A2P52657 109 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 SGMS1Q86VZ5 419 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ANKRD13CQ8N6S4 541 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 XXYLT1Q8NBI6 393 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF668Q96K58 619 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 DESI2Q9BSY9 194 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ANAPC5Q9UJX4 755 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 EPN1Q9Y6I3 576 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 KIF28PB7ZC32 967 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 SLC16A4O15374 487 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 FYB2Q5VWT5 728 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF449Q6P9G9 518 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 RUFY4Q6ZNE9 571 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 RFX6Q8HWS3 928 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 GANCQ8TET4 914 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ZBTB9Q96C00 473 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ERO1AQ96HE7 468 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF512BQ96KM6 892 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 RPGRIP1Q96KN7 1286 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 SPZ1Q9BXG8 430 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEB3A0JP26 581 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTECB2RU33 542 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SLC26A4O43511 780 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SRGNP10124 158 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 TCP1P17987 556 aaKnown RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 FCGRTP55899 365 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 RESTQ13127 1097 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 PDE1CQ14123 709 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 E2F5Q15329 346 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 ARL13BQ3SXY8 428 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 HHATQ5VTY9 493 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEBQ6S5H4 581 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 UNC13DQ70J99 1090 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SFR1Q86XK3 245 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 PAGE5Q96GU1 130 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 MRPL4Q9BYD3 311 aaKnown RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GBA2Q9HCG7 927 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GJB4Q9NTQ9 266 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 RWDD2AQ9UIY3 292 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 E9PMD0 336 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GFPT2O94808 682 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GH1P01241 217 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SRGAP2BP0DMP2 458 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 MAPK1P28482 360 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 PHBP35232 272 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GOLGA8FQ08AF8 430 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GOLGA8DPQ0D2H9 430 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 FAPQ12884 760 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 PPFIA1Q13136 1202 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 TOB2Q14106 344 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 DPCR1Q3MIW9 517 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 C16orf87Q6PH81 154 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 CLEC10AQ8IUN9 316 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SCYL3Q8IZE3 742 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 STAG2Q8N3U4 1231 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 FAM76AQ8TAV0 307 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 MAN1B1Q9UKM7 699 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 PFASO15067 1338 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 UNCXA6NJT0 531 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 TRIM66O15016 1216 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 BNIP3LO60238 219 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 NFKBIAP25963 317 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 MTMR3Q13615 1198 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 ERCC6LQ2NKX8 1250 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEDQ86YR6 584 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POLR3FQ9H1D9 316 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GINM1Q9NU53 330 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GPR75-ASB3A0A0A6YYF3 556 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 PRPSAP2O60256 369 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 NR3C2P08235 984 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 CASP14P31944 242 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 CDC42EP1Q00587 391 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF699Q32M78 642 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 ERO1BQ86YB8 467 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GLMNQ92990 594 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 CALN1Q9BXU9 219 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 DONSONQ9NYP3 566 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SEL1LQ9UBV2 794 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 CEMIPQ8WUJ3 1361 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 A0A087WWV3 80 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEFA5A3E0 1075 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEIP0CG38 1075 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 MMP14P50281 582 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 C10orf62Q5T681 223 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEGQ6S5H5 508 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 POTEEQ6S8J3 1075 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 ADAT2Q7Z6V5 191 aaKnown RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 EFCAB13Q8IY85 973 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 TAB3Q8N5C8 712 aaPredicted RBP7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SCFD2Q8WU76 684 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 SEPT1Q8WYJ6 367 aa7.43□□□□□ -1.22
SRGAP1-206ENST00000543397 GLT1D1Q96MS3 346 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms