RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 CCT7Q99832 543 aa6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GBA3Q9H227 469 aa6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 LY9Q9HBG7 655 aa6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 COMMD8Q9NX08 183 aa6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 IL20Q9NYY1 176 aa6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SAP30BPQ9UHR5 308 aaKnown RBP6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PNMA2Q9UL42 364 aa6.24□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CACNA1SQ13698 1873 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TNRC6CQ9HCJ0 1690 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CFAP69A5D8W1 941 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF233A6NK53 670 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 HNRNPRO43390 633 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GSTT2P0CG29 244 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GSTT2BP0CG30 244 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 METAP2P50579 478 aaKnown RBP eCLIP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NCALDP61601 193 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CEBPZQ03701 1054 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 P3H1Q32P28 736 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DPCR1Q3MIW9 517 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SYCP2LQ5T4T6 812 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 Q6ZNX1 250 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 FAM196AQ6ZSG2 479 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 FBXO33Q7Z6M2 555 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 UBE2Q1Q7Z7E8 422 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SGMS1Q86VZ5 419 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RNF10Q8N5U6 811 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TSEN2Q8NCE0 465 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 VPS37AQ8NEZ2 397 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CERKQ8TCT0 537 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF384Q8TF68 577 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SDR42E1Q8WUS8 393 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RIOK1Q9BRS2 568 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RNPEPL1Q9HAU8 725 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TMBIM4Q9HC24 238 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DDX43Q9NXZ2 648 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 C6orf203Q9P0P8 240 aaPredicted RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 DLGAP2Q9P1A6 1054 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZSWIM5Q9P217 1185 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TUBE1Q9UJT0 475 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TRPC5Q9UL62 973 aaPredicted RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TRIM64CA6NLI5 447 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SEMA3EO15041 775 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TACC1O75410 805 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PABPC4LP0CB38 370 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TGFB3P10600 412 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RXRAP19793 462 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GBP1P32455 592 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 OCRLQ01968 901 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PAK2Q13177 524 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ITGA9Q13797 1035 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CCDC122Q5T0U0 273 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SPECC1LQ69YQ0 1117 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 OTUD7BQ6GQQ9 843 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 IQCEQ6IPM2 695 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 MFSD6Q6ZSS7 791 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 FAM186BQ8IYM0 893 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 SPICE1Q8N0Z3 855 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ATRIPQ8WXE1 791 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 USP28Q96RU2 1077 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 KRT23Q9C075 422 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ANKRD2Q9GZV1 360 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TPK1Q9H3S4 243 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CCDC134Q9H6E4 229 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TIMMDC1Q9NPL8 285 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ATAD3AQ9NVI7 634 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 FANCLQ9NW38 375 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 LARSQ9P2J5 1176 aaKnown RBP6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF180Q9UJW8 692 aa6.23□□□□□ -1.41
RAB3GAP1-207ENST00000539493 A0A088AWK7 358 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 MAGEB6P1A0A0J9YX57 407 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 AKR1B15C9JRZ8 316 aaPredicted RBP6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ECE2O60344 883 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TBCAO75347 108 aaKnown RBP6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ASMTLO95671 621 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 RARAP10276 462 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 UBL4AP11441 157 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TMOD1P28289 359 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CDC27P30260 824 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 MATR3P43243 847 aaKnown RBP eCLIP6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ACADSBP45954 432 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NFIXQ14938 502 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 KARSQ15046 597 aaKnown RBP6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PARP6Q2NL67 630 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 TMEM67Q5HYA8 995 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PCNX4Q63HM2 1172 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GRAMD4Q6IC98 578 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 NEK10Q6ZWH5 1172 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CABP7Q86V35 215 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 MICU3Q86XE3 530 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 LURAP1LQ8IV03 231 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 CCDC197Q8NCU1 140 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 ZNF333Q96JL9 665 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GSDMAQ96QA5 445 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 C2orf49Q9BVC5 232 aaPredicted RBP6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PARVGQ9HBI0 331 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 GJB4Q9NTQ9 266 aa6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 PDS5AQ29RF7 1337 aaKnown RBP6.22□□□□□ -1.41
RAB3GAP1-207ENST00000539493 IRS2Q9Y4H2 1338 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms