RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 CASP10Q92851 521 aa16.69■□□□□ 0.26
CCDC144NL-202ENST00000539177 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
CCDC144NL-202ENST00000539177 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
CCDC144NL-202ENST00000539177 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
CCDC144NL-202ENST00000539177 DMDP11532 3685 aa16.69■□□□□ 0.26
CCDC144NL-202ENST00000539177 HBP1O60381 514 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 VTNP04004 478 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 GNAQP50148 359 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 TRMT1LQ7Z2T5 733 aaKnown RBP16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 CCDC60Q8IWA6 550 aaPredicted RBP16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 RNF169Q8NCN4 708 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 CASD1Q96PB1 797 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 MFSD1Q9H3U5 465 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 AGO4Q9HCK5 861 aaKnown RBP16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 NGRNQ9NPE2 291 aaKnown RBP16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 RNF19AQ9NV58 838 aa16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 RIF1Q5UIP0 2472 aaKnown RBP16.68■□□□□ 0.26
CCDC144NL-202ENST00000539177 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 PRC1O43663 620 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 CCNE2O96020 404 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 KRT17Q04695 432 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 RARS2Q5T160 578 aaKnown RBP16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 ASTLQ6HA08 431 aaPredicted RBP16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 KANK3Q6NY19 840 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 ABI1Q8IZP0 508 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 LRRC43Q8N309 656 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 TDRD5Q8NAT2 981 aaKnown RBP16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 RUFY2Q8WXA3 655 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 NKD2Q969F2 451 aaPredicted RBP16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
CCDC144NL-202ENST00000539177 COL1A2P08123 1366 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 CLASP2O75122 1294 aaKnown RBP16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 ATG7O95352 703 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 PPM1AP35813 382 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 SLC26A2P50443 739 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 CRYBB1P53674 252 aaPredicted RBP16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 DSC3Q14574 896 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 FAM160B1Q5W0V3 765 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 PDXDC2PQ6P474 469 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 FLCNQ8NFG4 579 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 NECTIN4Q96NY8 510 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 ZNF302Q9NR11 478 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 SPG21Q9NZD8 308 aa16.66■□□□□ 0.26
CCDC144NL-202ENST00000539177 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ZBTB42B2RXF5 422 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 NT5C1B-RDH14C9J2C7 533 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 SH2B2O14492 632 aaPredicted RBP16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 C22orf31O95567 290 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 CHMLP26374 656 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ID4P47928 161 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 CLCN3P51790 818 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 FAM189BP81408 668 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ITIH3Q06033 890 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 CEP55Q53EZ4 464 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ZNF484Q5JVG2 852 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ABHD15Q6UXT9 468 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 CKAP2LQ8IYA6 745 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ADSSL1Q8N142 457 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 METTL13Q8N6R0 699 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ZNF668Q96K58 619 aaPredicted RBP16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 ANO3Q9BYT9 981 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 LIMD1Q9UGP4 676 aa16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
CCDC144NL-202ENST00000539177 HOXA2O43364 376 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 GPR32O75388 356 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 ATP4AP20648 1035 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 MTHFRP42898 656 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 NAPAP54920 295 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 CWF19L1Q69YN2 538 aaKnown RBP16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 MCTP2Q6DN12 878 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 TYW1BQ6NUM6 668 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 TMTC3Q6ZXV5 915 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 SLC39A11Q8N1S5 342 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 HELQQ8TDG4 1101 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 AUTS2Q8WXX7 1259 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 LRRC2Q9BYS8 371 aa16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 RBM8AQ9Y5S9 174 aaKnown RBP16.64■□□□□ 0.25
CCDC144NL-202ENST00000539177 VPS13AQ96RL7 3174 aa16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 CENPBP07199 599 aaPredicted RBP16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 CALM1P0DP23 149 aa16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 CALM2P0DP24 149 aa16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 CALM3P0DP25 149 aa16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 ZNF76P36508 570 aa16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 MICU3Q86XE3 530 aa16.63■□□□□ 0.25
CCDC144NL-202ENST00000539177 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms