RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 GCP02774 474 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 CAPNS1P04632 268 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 GNAT1P11488 350 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 PDE6AP16499 860 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 DBPQ10586 325 aaPredicted RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 FSTL1Q12841 308 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 IFRD2Q12894 506 aaPredicted RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 BIRC2Q13490 618 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 RRP1BQ14684 758 aaKnown RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 CT47A1Q5JQC4 288 aaPredicted RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 PPP4R4Q6NUP7 873 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 RSPO2Q6UXX9 243 aaPredicted RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 LARP4Q71RC2 724 aaKnown RBP eCLIP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 CXXC5Q7LFL8 322 aaKnown RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 GPR135Q8IZ08 494 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 RPUSD2Q8IZ73 545 aaKnown RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 JDP2Q8WYK2 163 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 KCTD13Q8WZ19 329 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 SEC16BQ96JE7 1060 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 GMLQ99445 158 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 BRINP2Q9C0B6 783 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 TMX1Q9H3N1 280 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 SLC39A2Q9NP94 309 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 PCDH12Q9NPG4 1184 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 HECAQ9UBI9 543 aaPredicted RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 PPARGC1AQ9UBK2 798 aaKnown RBP2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 GABBR1Q9UBS5 961 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 FBXO10Q9UK96 956 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 PRKAB1Q9Y478 270 aa2.31□□□□□ -2.04
NPIPB4-209ENST00000538859 CCDC194A0A1B0GVG4 234 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 PMS2P1A4D2B8 440 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 PRC1O43663 620 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 SH3BP5O60239 455 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 SUSD5O60279 629 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 EIF3JO75822 258 aaKnown RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 HMGCRP04035 888 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 PTMSP20962 102 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 GJA8P48165 433 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 KCNQ1P51787 676 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 RBL2Q08999 1139 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 MAP4K2Q12851 820 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 CRHR2Q13324 411 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 SAFB2Q14151 953 aaKnown RBP eCLIP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 EIF4HQ15056 248 aaKnown RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 BRD3Q15059 726 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 HSP90AB4PQ58FF6 505 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 HABP4Q5JVS0 413 aaKnown RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 ODR4Q5SWX8 454 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 NBPF6Q5VWK0 638 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 BTBD8Q5XKL5 378 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 SPTY2D1Q68D10 685 aaPredicted RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 C6orf15Q6UXA7 325 aaPredicted RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 LBX2Q6XYB7 198 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 KCTD1Q719H9 257 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 HOMER1Q86YM7 354 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 MCF2L2Q86YR7 1114 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 FMNL3Q8IVF7 1028 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 WDR75Q8IWA0 830 aaKnown RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 FAM178BQ8IXR5 827 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 Q8N9P0 234 aaPredicted RBP2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 SCARB1Q8WTV0 552 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 APPBP2Q92624 585 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 ANAPC16Q96DE5 110 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 TMEM176AQ96HP8 235 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 NBPF4Q96M43 638 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 MPHOSPH9Q99550 1183 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 KIAA1683Q9H0B3 1180 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 SIRPGQ9P1W8 387 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 STRIP2Q9ULQ0 834 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 MRVI1Q9Y6F6 885 aa2.3□□□□□ -2.04
NPIPB4-209ENST00000538859 ERVV-2B6SEH9 535 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 CREB3O43889 395 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 RPS6KA4O75676 772 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 RHOBTB3O94955 611 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 LMNAP02545 664 aaKnown RBP2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 ATF4P18848 351 aaPredicted RBP2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 GRK2P25098 689 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 GJA4P35212 333 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 GRK3P35626 688 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 GRIA2P42262 883 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 MRE11P49959 708 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 MEOX1P50221 254 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 SLC25A3Q00325 362 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 PCOLCEQ15113 449 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 RALBP1Q15311 655 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 KIZQ2M2Z5 673 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 PLEKHG6Q3KR16 790 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 MBNL2Q5VZF2 373 aaKnown RBP2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 TRIM68Q6AZZ1 485 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 ANKS3Q6ZW76 656 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 USP53Q70EK8 1073 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 APBB1IPQ7Z5R6 666 aaPredicted RBP2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 ANKRD35Q8N283 1001 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 SHCBP1Q8NEM2 672 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 DCAF4Q8WV16 495 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 HAS1Q92839 578 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 DEPDC7Q96QD5 511 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 PHF20Q9BVI0 1012 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 OR10A2Q9H208 303 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 NRDE2Q9H7Z3 1164 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms