RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
NPIPB4-209ENST00000538859 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
NPIPB4-209ENST00000538859 POTEDQ86YR6 584 aa15.07■□□□□ 0
NPIPB4-209ENST00000538859 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
NPIPB4-209ENST00000538859 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
NPIPB4-209ENST00000538859 FOXD1Q16676 465 aa14.15□□□□□ -0.14
NPIPB4-209ENST00000538859 MSH5O43196 834 aa13.52□□□□□ -0.25
NPIPB4-209ENST00000538859 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
NPIPB4-209ENST00000538859 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
NPIPB4-209ENST00000538859 ADRA2BP18089 450 aa12.33□□□□□ -0.44
NPIPB4-209ENST00000538859 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
NPIPB4-209ENST00000538859 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
NPIPB4-209ENST00000538859 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
NPIPB4-209ENST00000538859 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-209ENST00000538859 POTEHQ6S545 545 aa11.56□□□□□ -0.56
NPIPB4-209ENST00000538859 RNF39Q9H2S5 420 aa11.52□□□□□ -0.57
NPIPB4-209ENST00000538859 C1QBPQ07021 282 aaKnown RBP11.23□□□□□ -0.61
NPIPB4-209ENST00000538859 DCAF8L1A6NGE4 600 aa11.2□□□□□ -0.62
NPIPB4-209ENST00000538859 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
NPIPB4-209ENST00000538859 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
NPIPB4-209ENST00000538859 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.69
NPIPB4-209ENST00000538859 RNF216Q9NWF9 866 aaPredicted RBP10.51□□□□□ -0.73
NPIPB4-209ENST00000538859 DSG3P32926 999 aa10.45□□□□□ -0.74
NPIPB4-209ENST00000538859 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
NPIPB4-209ENST00000538859 CNKSR2Q8WXI2 1034 aa10.32□□□□□ -0.76
NPIPB4-209ENST00000538859 PPP4R3CPQ6ZMV5 832 aa10.31□□□□□ -0.76
NPIPB4-209ENST00000538859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.76
NPIPB4-209ENST00000538859 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
NPIPB4-209ENST00000538859 CAPN15O75808 1086 aa10.17□□□□□ -0.78
NPIPB4-209ENST00000538859 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
NPIPB4-209ENST00000538859 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
NPIPB4-209ENST00000538859 ABCB7O75027 752 aa9.89□□□□□ -0.83
NPIPB4-209ENST00000538859 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
NPIPB4-209ENST00000538859 RBM42Q9BTD8 480 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-209ENST00000538859 TRHP20396 242 aaPredicted RBP9.76□□□□□ -0.85
NPIPB4-209ENST00000538859 HAX1O00165 279 aa9.74□□□□□ -0.85
NPIPB4-209ENST00000538859 EVX2Q03828 476 aa9.71□□□□□ -0.86
NPIPB4-209ENST00000538859 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
NPIPB4-209ENST00000538859 LHX8Q68G74 356 aa9.68□□□□□ -0.86
NPIPB4-209ENST00000538859 ZNF219Q9P2Y4 722 aaPredicted RBP9.67□□□□□ -0.86
NPIPB4-209ENST00000538859 FXR2P51116 673 aaKnown RBP eCLIP9.5□□□□□ -0.89
NPIPB4-209ENST00000538859 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-209ENST00000538859 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
NPIPB4-209ENST00000538859 AKT1S1Q96B36 256 aa9.47□□□□□ -0.89
NPIPB4-209ENST00000538859 APLP2Q06481 763 aa9.46□□□□□ -0.9
NPIPB4-209ENST00000538859 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
NPIPB4-209ENST00000538859 SLC4A2P04920 1241 aa9.39□□□□□ -0.91
NPIPB4-209ENST00000538859 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
NPIPB4-209ENST00000538859 GABBR2O75899 941 aa9.34□□□□□ -0.91
NPIPB4-209ENST00000538859 POLA2Q14181 598 aa9.3□□□□□ -0.92
NPIPB4-209ENST00000538859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
NPIPB4-209ENST00000538859 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-209ENST00000538859 C19orf67A6NJJ6 358 aa9.23□□□□□ -0.93
NPIPB4-209ENST00000538859 POTEIP0CG38 1075 aa9.22□□□□□ -0.93
NPIPB4-209ENST00000538859 SAMD1Q6SPF0 538 aaPredicted RBP9.18□□□□□ -0.94
NPIPB4-209ENST00000538859 POTEMA6NI47 508 aa9.17□□□□□ -0.94
NPIPB4-209ENST00000538859 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
NPIPB4-209ENST00000538859 PRKAR2AP13861 404 aaKnown RBP9.06□□□□□ -0.96
NPIPB4-209ENST00000538859 OSCARQ8IYS5 282 aa9.05□□□□□ -0.96
NPIPB4-209ENST00000538859 OTUD5Q96G74 571 aa9.03□□□□□ -0.96
NPIPB4-209ENST00000538859 PCDH10Q9P2E7 1040 aa9.02□□□□□ -0.97
NPIPB4-209ENST00000538859 ZBTB12Q9Y330 459 aaPredicted RBP8.91□□□□□ -0.98
NPIPB4-209ENST00000538859 POTEB2H3BUK9 544 aa8.9□□□□□ -0.98
NPIPB4-209ENST00000538859 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
NPIPB4-209ENST00000538859 CHADLQ6NUI6 762 aa8.78□□□□□ -1
NPIPB4-209ENST00000538859 DCBLD2Q96PD2 775 aa8.76□□□□□ -1.01
NPIPB4-209ENST00000538859 CLEC11AQ9Y240 323 aa8.75□□□□□ -1.01
NPIPB4-209ENST00000538859 ATF5Q9Y2D1 282 aaPredicted RBP8.75□□□□□ -1.01
NPIPB4-209ENST00000538859 CLCN6P51797 869 aa8.72□□□□□ -1.01
NPIPB4-209ENST00000538859 MYCNP04198 464 aaPredicted RBP8.71□□□□□ -1.02
NPIPB4-209ENST00000538859 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
NPIPB4-209ENST00000538859 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-209ENST00000538859 SPDYE2BA6NHP3 402 aa8.63□□□□□ -1.03
NPIPB4-209ENST00000538859 SPDYE6P0CI01 402 aa8.63□□□□□ -1.03
NPIPB4-209ENST00000538859 SPDYE2Q495Y8 402 aa8.63□□□□□ -1.03
NPIPB4-209ENST00000538859 POTEJP0CG39 1038 aa8.62□□□□□ -1.03
NPIPB4-209ENST00000538859 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
NPIPB4-209ENST00000538859 GALR2O43603 387 aaPredicted RBP8.54□□□□□ -1.04
NPIPB4-209ENST00000538859 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
NPIPB4-209ENST00000538859 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
NPIPB4-209ENST00000538859 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
NPIPB4-209ENST00000538859 FARP1Q9Y4F1 1045 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-209ENST00000538859 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
NPIPB4-209ENST00000538859 PRR29P0C7W0 189 aa8.46□□□□□ -1.06
NPIPB4-209ENST00000538859 SSUH2Q9Y2M2 353 aa8.46□□□□□ -1.06
NPIPB4-209ENST00000538859 ZRANB1Q9UGI0 708 aa8.41□□□□□ -1.06
NPIPB4-209ENST00000538859 KCNA4P22459 653 aa8.39□□□□□ -1.07
NPIPB4-209ENST00000538859 MAMSTRQ6ZN01 415 aa8.39□□□□□ -1.07
NPIPB4-209ENST00000538859 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
NPIPB4-209ENST00000538859 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
NPIPB4-209ENST00000538859 ZNF692Q9BU19 519 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-209ENST00000538859 C7P10643 843 aa8.29□□□□□ -1.08
NPIPB4-209ENST00000538859 ASTLQ6HA08 431 aaPredicted RBP8.29□□□□□ -1.08
NPIPB4-209ENST00000538859 FBLN2P98095 1184 aa8.27□□□□□ -1.09
NPIPB4-209ENST00000538859 MKRN4PQ13434 485 aaPredicted RBP8.27□□□□□ -1.09
NPIPB4-209ENST00000538859 SLC39A7Q92504 469 aa8.27□□□□□ -1.09
NPIPB4-209ENST00000538859 SCUBE2Q9NQ36 999 aa8.27□□□□□ -1.09
NPIPB4-209ENST00000538859 ATMINO43313 823 aaPredicted RBP8.25□□□□□ -1.09
NPIPB4-209ENST00000538859 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
NPIPB4-209ENST00000538859 POTEFA5A3E0 1075 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms