RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TTC30AQ86WT1 665 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 MB21D1Q8N884 522 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 FAF2Q96CS3 445 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 ASNSD1Q9NWL6 643 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 KLHL8Q9P2G9 620 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-205ENST00000538291 SOWAHDA6NJG2 315 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 RASGRF2O14827 1237 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 CYP27B1O15528 508 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 YWHAHQ04917 246 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-205ENST00000538291 KIAA1755Q5JYT7 1200 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 TTC19Q6DKK2 380 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-205ENST00000538291 RBM41Q96IZ5 413 aaKnown RBP18.02■□□□□ 0.48
SCARB1-205ENST00000538291 MMP19Q99542 508 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 ADAMTS1Q9UHI8 967 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 NCAPD2Q15021 1401 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 ZMYND10O75800 440 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 FDX1P10109 184 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 NECTIN1Q15223 517 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 PPP1R9AQ9ULJ8 1098 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 PYCARDQ9ULZ3 195 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 NEMP1O14524 444 aa18.02■□□□□ 0.47
SCARB1-205ENST00000538291 MX2P20592 715 aa18.02■□□□□ 0.47
SCARB1-205ENST00000538291 SFR1Q86XK3 245 aa18.02■□□□□ 0.47
SCARB1-205ENST00000538291 PANX2Q96RD6 677 aa18.02■□□□□ 0.47
SCARB1-205ENST00000538291 CNOT10Q9H9A5 744 aaKnown RBP18.02■□□□□ 0.47
SCARB1-205ENST00000538291 STRIP2Q9ULQ0 834 aa18.02■□□□□ 0.47
SCARB1-205ENST00000538291 FCER1AP12319 257 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 SLCO1A2P46721 670 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L15C9J2P7 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L13C9JLJ4 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L11C9JVI0 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L18D6R9N7 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L22D6RA61 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L17D6RBQ6 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L19D6RCP7 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L20D6RJB6 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L24Q0WX57 530 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-205ENST00000538291 USP17L6PQ6QN14 398 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 FBXL13Q8NEE6 735 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 TUBB6Q9BUF5 446 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 MROH7-TTC4A0A0A0MT08 1334 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 CALB1P05937 261 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 TTC13Q8NBP0 860 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 OTUD5Q96G74 571 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 FMO2Q99518 471 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 TMEM247A6NEH6 219 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 CYP27A1Q02318 531 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 ART3Q13508 389 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
SCARB1-205ENST00000538291 DRC3Q9H069 523 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 GDAQ9Y2T3 454 aa18.01■□□□□ 0.47
SCARB1-205ENST00000538291 POTEMA6NI47 508 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 CTNND1O60716 968 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 NR3C1P04150 777 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 OCRLQ01968 901 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 KRT31Q15323 416 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 WHAMMQ8TF30 809 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 CNOT8Q9UFF9 292 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 CDK12Q9NYV4 1490 aaPredicted RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 ATP8B1O43520 1251 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 P4HBP07237 508 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 PLS3P13797 630 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 ATG16L1Q676U5 607 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 PDCD7Q8N8D1 485 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 EXT2Q93063 718 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 IFT43Q96FT9 208 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 ACAP3Q96P50 834 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 FSD1LQ9BXM9 530 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 PIDD1Q9HB75 910 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 STAP1Q9ULZ2 295 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 DIS3Q9Y2L1 958 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 FAM196BA6NMK8 535 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 KRT37O76014 449 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 FRA10AC1Q70Z53 315 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 RHPN2Q8IUC4 686 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 ZBTB18Q99592 522 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 FAM213AQ9BRX8 229 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 GCOM2Q9BZD3 368 aaPredicted RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 SLC16A4O15374 487 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 QARSP47897 775 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 EIF3BP55884 814 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 PROM2Q8N271 834 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 SCG3Q8WXD2 468 aaKnown RBP18■□□□□ 0.47
SCARB1-205ENST00000538291 DYDC2Q96IM9 177 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 ANAPC7Q9UJX3 599 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 A0A087WWV3 80 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 IFNA8P32881 189 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 TTC39CQ8N584 583 aa18■□□□□ 0.47
SCARB1-205ENST00000538291 LIG3P49916 1009 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 CELF1Q92879 486 aaKnown RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 MIF4GDA9UHW6 222 aaKnown RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 CCT5P48643 541 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 ORC2Q13416 577 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-205ENST00000538291 HSP90AA5PQ58FG0 334 aa17.99■□□□□ 0.47
SCARB1-205ENST00000538291 TMEM270Q6UE05 265 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms