RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 BMPR1AP36894 532 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 NLRP11P59045 1033 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 GPM6BQ13491 265 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 CLP1Q92989 425 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 LLPHQ9BRT6 129 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 LMAN2LQ9H0V9 348 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 ERVK-5Q9HDB9 667 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 KCNMB3Q9NPA1 279 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 RGS18Q9NS28 235 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 NOC2LQ9Y3T9 749 aaKnown RBP13.34□□□□□ -0.27
KNTC1-208ENST00000535410 GBF1Q92538 1859 aa13.33□□□□□ -0.27
KNTC1-208ENST00000535410 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 HOXA2O43364 376 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 GPR32O75388 356 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 MMP1P03956 469 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 FDPSP14324 419 aaKnown RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 EIF4BP23588 611 aaKnown RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 CTNNB1P35222 781 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 TMEM266Q2M3C6 531 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 OSMRQ99650 979 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 ADAM2Q99965 735 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 GCOM2Q9BZD3 368 aaPredicted RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 PRRC2BQ5JSZ5 2229 aaKnown RBP13.33□□□□□ -0.28
KNTC1-208ENST00000535410 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
KNTC1-208ENST00000535410 MICAL3Q7RTP6 2002 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 SLC37A4O43826 429 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 SEC24BO95487 1268 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 VTNP04004 478 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 CLCN3P51790 818 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 EPHA7Q15375 998 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 TARBP2Q15633 366 aaKnown RBP13.32□□□□□ -0.28
KNTC1-208ENST00000535410 CSPP1Q1MSJ5 1256 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 RTN4RL1Q86UN2 441 aaPredicted RBP13.32□□□□□ -0.28
KNTC1-208ENST00000535410 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 NLRP7Q8WX94 980 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 RSPH1Q8WYR4 309 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 P2RX5Q93086 422 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 ELAC1Q9H777 363 aaKnown RBP13.32□□□□□ -0.28
KNTC1-208ENST00000535410 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 ATP6V0A4Q9HBG4 840 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 DACT1Q9NYF0 836 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
KNTC1-208ENST00000535410 COL4A6Q14031 1691 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 CHD7Q9P2D1 2997 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
KNTC1-208ENST00000535410 RFC5P40937 340 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 FAM189BP81408 668 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 UGCGQ16739 394 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 KRT40Q6A162 431 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 ZNF410Q86VK4 478 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 C4orf19Q8IY42 314 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
KNTC1-208ENST00000535410 CRIPAKQ8N1N5 446 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 LINC01465Q8N7H1 131 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 BANK1Q8NDB2 785 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 TMEM40Q8WWA1 233 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 GJA10Q969M2 543 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 ADAMTS10Q9H324 1103 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 ZSWIM4Q9H7M6 989 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 RC3H2Q9HBD1 1191 aaKnown RBP13.31□□□□□ -0.28
KNTC1-208ENST00000535410 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 TMEM161AQ9NX61 479 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 KIF3AQ9Y496 699 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 PCDHB12Q9Y5F1 795 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 TRANK1O15050 2925 aa13.31□□□□□ -0.28
KNTC1-208ENST00000535410 CARNS1A5YM72 827 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 BTBD18B2RXH4 712 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 C9IYK1 514 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 TNFRSF10AO00220 468 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 ASAP2O43150 1006 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 SKIP12755 728 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 DARSP14868 501 aaKnown RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 SFPQP23246 707 aaKnown RBP eCLIP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 GPC3P51654 580 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 NR5A1Q13285 461 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 GNL2Q13823 731 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms