RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 RASGRF2O14827 1237 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 AKAP3O75969 853 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 CFBP00751 764 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 FGRP09769 529 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 CYP11B2P19099 503 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 FXR2P51116 673 aaKnown RBP eCLIP17.23■□□□□ 0.35
MCF2L-232ENST00000535094 PDIA5Q14554 519 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
MCF2L-232ENST00000535094 PNMA6FA0A0J9YX94 578 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 ATMINO43313 823 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-232ENST00000535094 MED24O75448 989 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 ANKRD20A8PQ5CZ79 823 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 SH2D3AQ9BRG2 576 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 MYH7P12883 1935 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 TRAPPC3O43617 180 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 SLC8A1P32418 973 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 SPRED3Q2MJR0 410 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 SWT1Q5T5J6 900 aaKnown RBP17.22■□□□□ 0.35
MCF2L-232ENST00000535094 EPS8L3Q8TE67 593 aaKnown RBP17.22■□□□□ 0.35
MCF2L-232ENST00000535094 USP40Q9NVE5 1235 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 PPP1R9AQ9ULJ8 1098 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 SRCAPQ6ZRS2 3230 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 DNAJC19Q96DA6 116 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 FAM167BQ9BTA0 163 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 ANO3Q9BYT9 981 aa17.22■□□□□ 0.35
MCF2L-232ENST00000535094 FERP16591 822 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 GCKP35557 465 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 CETN1Q12798 172 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 ASPRV1Q53RT3 343 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 TMC3Q7Z5M5 1100 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 C18orf8Q96DM3 657 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 NGLY1Q96IV0 654 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 MTMR9Q96QG7 549 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 MTUS1Q9ULD2 1270 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 RABGAP1Q9Y3P9 1069 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
MCF2L-232ENST00000535094 LONRF1Q17RB8 773 aa17.21■□□□□ 0.35
MCF2L-232ENST00000535094 ASTE1Q2TB18 679 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-232ENST00000535094 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-232ENST00000535094 M0R2N6 131 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 LRIG3Q6UXM1 1119 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 SEMA4AQ9H3S1 761 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 UBE2TQ9NPD8 197 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-232ENST00000535094 BCL9O00512 1426 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 F8VZ95 297 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 TTLL1O95922 423 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 STX2P32856 288 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 DOK7Q18PE1 504 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 CCDC127Q96BQ5 260 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 THRAP3Q9Y2W1 955 aaKnown RBP17.2■□□□□ 0.34
MCF2L-232ENST00000535094 FNTAP49354 379 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
MCF2L-232ENST00000535094 HP1BP3Q5SSJ5 553 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-232ENST00000535094 ODR4Q5SWX8 454 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 PPM1KQ8N3J5 372 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 MTMR4Q9NYA4 1195 aa17.2■□□□□ 0.34
MCF2L-232ENST00000535094 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-232ENST00000535094 CCT8L1PA6NM43 557 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 THAP2Q9H0W7 228 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 METTL14Q9HCE5 456 aaKnown RBP17.19■□□□□ 0.34
MCF2L-232ENST00000535094 FGFR1OP2Q9NVK5 253 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 DDX3XO00571 662 aaKnown RBP eCLIP17.19■□□□□ 0.34
MCF2L-232ENST00000535094 TAOK1Q7L7X3 1001 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 GSTA5Q7RTV2 222 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 TAB3Q8N5C8 712 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-232ENST00000535094 HAS1Q92839 578 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 STAMBPL1Q96FJ0 436 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 FAM118BQ9BPY3 351 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 CNOT10Q9H9A5 744 aaKnown RBP17.19■□□□□ 0.34
MCF2L-232ENST00000535094 NOD2Q9HC29 1040 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 FOXO6A8MYZ6 492 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 TCP11X1B4DZS4 312 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
MCF2L-232ENST00000535094 QRICH1Q2TAL8 776 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 C10orf76Q5T2E6 689 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 JAMLQ86YT9 394 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 CD209Q9NNX6 404 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 AIPL1Q9NZN9 384 aa17.19■□□□□ 0.34
MCF2L-232ENST00000535094 LCA5LO95447 670 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 LMNB1P20700 586 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 LACTBP83111 547 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms