RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 DDX49Q9Y6V7 483 aaKnown RBP6.55□□□□□ -1.36
CHKA-208ENST00000533910 B2RBV5 119 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 FIBPO43427 364 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 DNAJA2O60884 412 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 RAD17O75943 681 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 SPATA31C1P0DKV0 1188 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 ARL4DP49703 201 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 UBE2HP62256 183 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 KIF23Q02241 960 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 CXCL9Q07325 125 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 SSRP1Q08945 709 aaKnown RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 SETDB1Q15047 1291 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 FOXD4L6Q3SYB3 417 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 CCDC181Q5TID7 509 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 FKBP1CQ5VVH2 108 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 KRT40Q6A162 431 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 FAM173BQ6P4H8 233 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 FOXD4L3Q6VB84 417 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 ZNF444Q8N0Y2 327 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 CTCFLQ8NI51 663 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 NUP133Q8WUM0 1156 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 LEO1Q8WVC0 666 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 AIFM3Q96NN9 605 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 TMEM47Q9BQJ4 181 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 PLVAPQ9BX97 442 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 SLC26A6Q9BXS9 759 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 SCAND2PQ9GZW5 306 aaPredicted RBP6.54□□□□□ -1.36
CHKA-208ENST00000533910 KAT14Q9H8E8 782 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 HDAC9Q9UKV0 1011 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 CNTNAP1P78357 1384 aa6.54□□□□□ -1.36
CHKA-208ENST00000533910 BAZ2BQ9UIF8 2168 aaKnown RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 DDTLA6NHG4 134 aaPredicted RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 KIF28PB7ZC32 967 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 UBE2Q2LH0YL09 131 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 DLL1O00548 723 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PRPF3O43395 683 aaKnown RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 DEAF1O75398 565 aaPredicted RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 HTR3BO95264 441 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PLEKHA8P1O95397 391 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 MMP1P03956 469 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 CYP11A1P05108 521 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 TOP1P11387 765 aaKnown RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 AKR1B1P15121 316 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 RPS12P25398 132 aaKnown RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 U2AF2P26368 475 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHKA-208ENST00000533910 KIF5BP33176 963 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 GUCY1A2P33402 732 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 CHRNA4P43681 627 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PRELPP51888 382 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 RBM5P52756 815 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHKA-208ENST00000533910 CACNB3P54284 484 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 ZNF280AP59817 542 aaPredicted RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 RASA3Q14644 834 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PKN1Q16512 942 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PRRT3Q5FWE3 981 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 XP32Q5T750 250 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 CIAPIN1Q6FI81 312 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 OTUD7BQ6GQQ9 843 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 TATDN1Q6P1N9 297 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 ZFPM1Q8IX07 1006 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 GPATCH11Q8N954 259 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 SHISA4Q96DD7 197 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 CEP95Q96GE4 821 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PRMT6Q96LA8 375 aaPredicted RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 CCDC17Q96LX7 622 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 DEPDC7Q96QD5 511 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 EHMT1Q9H9B1 1298 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 SPON1Q9HCB6 807 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 GJB4Q9NTQ9 266 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 MTMR4Q9NYA4 1195 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 ACTR10Q9NZ32 417 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 PI4KBQ9UBF8 816 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 CFAP45Q9UL16 551 aa6.53□□□□□ -1.36
CHKA-208ENST00000533910 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHKA-208ENST00000533910 GOLGB1Q14789 3259 aaKnown RBP6.53□□□□□ -1.36
CHKA-208ENST00000533910 PAPPA2Q9BXP8 1791 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 DOCK1Q14185 1865 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 FSD2A1L4K1 749 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 PRAMEF27A3QJZ7 478 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 FZD9O00144 591 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 YEATS4O95619 227 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 SNHG28P0DPA3 235 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 SMARCA1P28370 1054 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 GNAQP50148 359 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 ZNF445P59923 1031 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 GUCY1B3Q02153 619 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 TRIM29Q14134 588 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 TNIP1Q15025 636 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 DLGAP5Q15398 846 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 ZYXQ15942 572 aaKnown RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 PFKFB3Q16875 520 aaPredicted RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 SLC35G1Q2M3R5 365 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 FAM83AQ86UY5 434 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 SRBD1Q8N5C6 995 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms