RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 BLOC1S3Q6QNY0 202 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 ATP6V0A1Q93050 837 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 AP5M1Q9H0R1 490 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 ZSWIM4Q9H7M6 989 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 PKD2L1Q9P0L9 805 aa12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-218ENST00000533761 KIF20AO95235 890 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 GGPS1O95749 300 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 RPN1P04843 607 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 KRT18P05783 430 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 ASIC1P78348 528 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 BRDTQ58F21 947 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 CNNM4Q6P4Q7 775 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 METTL7BQ6UX53 244 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 GAS2L3Q86XJ1 694 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 GJA10Q969M2 543 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 DEFB118Q96PH6 123 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 PLIN2Q99541 437 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 HSD17B14Q9BPX1 270 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 C7orf25Q9BPX7 421 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 TRIM9Q9C026 710 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 DNAJC25Q9H1X3 360 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 UNC45AQ9H3U1 944 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 XPNPEP3Q9NQH7 507 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 EXOC1Q9NV70 894 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 SLC9A2Q9UBY0 812 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 PCDHA10Q9Y5I2 948 aa12.16□□□□□ -0.46
CCDC90B-218ENST00000533761 PVALEFA0A1B0GWK0 134 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 DDX39AO00148 427 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 BIN1O00499 593 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 NOP56O00567 594 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 ADCY6O43306 1168 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 FARP2O94887 1054 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 S1PR4O95977 384 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 AVPP01185 164 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 PSAPP07602 524 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 GJB1P08034 283 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 PLA2G4BP0C869 781 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 TMEM63BQ5T3F8 832 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 MIS18BP1Q6P0N0 1132 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 B3GNT9Q6UX72 402 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 TPH2Q8IWU9 490 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 ARRDC4Q8NCT1 418 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 RNF214Q8ND24 703 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 PNMA5Q96PV4 448 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 LXNQ9BS40 222 aa12.15□□□□□ -0.46
CCDC90B-218ENST00000533761 LOXHD1Q8IVV2 1947 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 DHX15O43143 795 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 TLL1O43897 1013 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 MED24O75448 989 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 EYA4O95677 639 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 SSBP05455 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 CAPN2P17655 700 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 CPT1AP50416 773 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 GJA9P57773 515 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 PSMC5P62195 406 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 CYP4A11Q02928 519 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 MORC3Q14149 939 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 GJC2Q5T442 439 aaPredicted RBP12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 ZNF658Q5TYW1 1059 aaPredicted RBP12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 OTUD6AQ7L8S5 288 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 RNF180Q86T96 592 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 CCDC65Q8IXS2 484 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 PPTC7Q8NI37 304 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 COPS5Q92905 334 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 UIMC1Q96RL1 719 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 BLOC1S4Q9NUP1 217 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 MAN1B1Q9UKM7 699 aa12.14□□□□□ -0.47
CCDC90B-218ENST00000533761 IKBKBO14920 756 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 PPFIA4O75335 1185 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SLITRK3O94933 977 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 LYPLA2O95372 231 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SGPL1O95470 568 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SPATA31C1P0DKV0 1188 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 NKX3-2P78367 333 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 PSMD2Q13200 908 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 CUL4BQ13620 913 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 DHX8Q14562 1220 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 FSCN1Q16658 493 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 DPCR1Q3MIW9 517 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms