RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 MRPL42Q9Y6G3 142 aaKnown RBP20.09■□□□□ 0.81
SMG1-203ENST00000532700 H3BNC9 293 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 BMP1P13497 986 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 NFX1Q12986 1120 aaKnown RBP20.08■□□□□ 0.81
SMG1-203ENST00000532700 GPM6BQ13491 265 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 PAN2Q504Q3 1202 aaKnown RBP20.08■□□□□ 0.81
SMG1-203ENST00000532700 EFCAB12Q6NXP0 572 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 MOXD1Q6UVY6 613 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 FIBCD1Q8N539 461 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 ADAMTS19Q8TE59 1207 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 TNPO1Q92973 898 aaKnown RBP20.08■□□□□ 0.81
SMG1-203ENST00000532700 ADAMTS10Q9H324 1103 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 TCEAL9Q9UHQ7 104 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 ST3GAL5Q9UNP4 418 aa20.08■□□□□ 0.81
SMG1-203ENST00000532700 BRWD1Q9NSI6 2320 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 GRM6O15303 877 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 RPS6KA5O75582 802 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 CSPG5O95196 566 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 CTNNB1P35222 781 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 JAK3P52333 1124 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 ANKRD1Q15327 319 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 PLA2G4FQ68DD2 849 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 NEK8Q86SG6 692 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 FAM177A1Q8N128 213 aaPredicted RBP20.07■□□□□ 0.8
SMG1-203ENST00000532700 ZNF579Q8NAF0 562 aaKnown RBP20.07■□□□□ 0.8
SMG1-203ENST00000532700 C22orf23Q9BZE7 217 aa20.07■□□□□ 0.8
SMG1-203ENST00000532700 CSDE1O75534 798 aaKnown RBP20.06■□□□□ 0.8
SMG1-203ENST00000532700 RPLP2P05387 115 aaKnown RBP20.06■□□□□ 0.8
SMG1-203ENST00000532700 FGFR4P22455 802 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 SFNP31947 248 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 NLRP11P59045 1033 aaKnown RBP20.06■□□□□ 0.8
SMG1-203ENST00000532700 DSC3Q14574 896 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 NPAS4Q8IUM7 802 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 FAM167AQ96KS9 214 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 ADAM2Q99965 735 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 LMCD1Q9NZU5 365 aa20.06■□□□□ 0.8
SMG1-203ENST00000532700 SEPT9Q9UHD8 586 aaPredicted RBP20.06■□□□□ 0.8
SMG1-203ENST00000532700 C9IYK1 514 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 CCNT1O60563 726 aaKnown RBP20.05■□□□□ 0.8
SMG1-203ENST00000532700 DNAJB1P25685 340 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 CRYBB1P53674 252 aaPredicted RBP20.05■□□□□ 0.8
SMG1-203ENST00000532700 SPIRE1Q08AE8 756 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 CAMK1Q14012 370 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 BTG3Q14201 252 aaPredicted RBP20.05■□□□□ 0.8
SMG1-203ENST00000532700 ANO5Q75V66 913 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 CLP1Q92989 425 aaKnown RBP20.05■□□□□ 0.8
SMG1-203ENST00000532700 MRPL38Q96DV4 380 aaKnown RBP20.05■□□□□ 0.8
SMG1-203ENST00000532700 AKT3Q9Y243 479 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 TTC28Q96AY4 2481 aa20.05■□□□□ 0.8
SMG1-203ENST00000532700 MYO7AQ13402 2215 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 BTBD18B2RXH4 712 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 C5orf67F2Z3F1 127 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 BMPR1AP36894 532 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 GPC3P51654 580 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 PPP2R5CQ13362 524 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 FAM102BQ5T8I3 360 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 PPP4R3AQ6IN85 833 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 RDM1Q8NG50 284 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 SAMD11Q96NU1 681 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 FTHL17Q9BXU8 183 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 NIFKQ9BYG3 293 aaKnown RBP20.04■□□□□ 0.8
SMG1-203ENST00000532700 RNF19AQ9NV58 838 aa20.04■□□□□ 0.8
SMG1-203ENST00000532700 ZBTB39O15060 712 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 MMP1P03956 469 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 KRT2P35908 639 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 SARSP49591 514 aaKnown RBP20.03■□□□□ 0.8
SMG1-203ENST00000532700 NPEPPSP55786 919 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 GUCY1B3Q02153 619 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 TCEAL5Q5H9L2 206 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 HLA-CQ95604 372 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
SMG1-203ENST00000532700 RGS18Q9NS28 235 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 NRBP2Q9NSY0 501 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 RGL1Q9NZL6 768 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 CEP131Q9UPN4 1083 aa20.03■□□□□ 0.8
SMG1-203ENST00000532700 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.02■□□□□ 0.8
SMG1-203ENST00000532700 IGKV6-21A0A0C4DH24 114 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 MAGEB2O15479 319 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 FGFR1P11362 822 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 GTF2F1P35269 517 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMG1-203ENST00000532700 TBC1D8BQ0IIM8 1120 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 XKR3Q5GH77 459 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 KSR1Q8IVT5 923 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 CMTR2Q8IYT2 770 aaKnown RBP20.02■□□□□ 0.8
SMG1-203ENST00000532700 SYMPKQ92797 1274 aaKnown RBP20.02■□□□□ 0.8
SMG1-203ENST00000532700 UHRF1Q96T88 793 aaPredicted RBP20.02■□□□□ 0.8
SMG1-203ENST00000532700 UBE2ZQ9H832 354 aaPredicted RBP20.02■□□□□ 0.8
SMG1-203ENST00000532700 PCDHGC5Q9Y5F6 944 aa20.02■□□□□ 0.8
SMG1-203ENST00000532700 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
SMG1-203ENST00000532700 ITGB1P05556 798 aa20.01■□□□□ 0.79
SMG1-203ENST00000532700 DIS3L2Q8IYB7 885 aaKnown RBP20.01■□□□□ 0.79
SMG1-203ENST00000532700 MAP7D2Q96T17 732 aa20.01■□□□□ 0.79
SMG1-203ENST00000532700 BMP2KQ9NSY1 1161 aaPredicted RBP20.01■□□□□ 0.79
SMG1-203ENST00000532700 COG5Q9UP83 839 aa20.01■□□□□ 0.79
SMG1-203ENST00000532700 DENND3A2RUS2 1198 aa20■□□□□ 0.79
SMG1-203ENST00000532700 DARSP14868 501 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms