RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MTUS1	Q9ULD2	1270 aa		13.21	□□□□□ -0.29
PSMC3-205	ENST00000528362	AKT3	Q9Y243	479 aa		13.21	□□□□□ -0.29
PSMC3-205	ENST00000528362	TRANK1	O15050	2925 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	DDX11L8	A8MPP1	907 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	MGEA5	O60502	916 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	LPXN	O60711	386 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	P4HB	P07237	508 aa	Known RBP	13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	TMOD1	P28289	359 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	NFX1	Q12986	1120 aa	Known RBP	13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	GRB10	Q13322	594 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	DRP2	Q13474	957 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	EPHA7	Q15375	998 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	PLA2G4F	Q68DD2	849 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	FAM228A	Q86W67	206 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	CRIPAK	Q8N1N5	446 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	FAM184A	Q8NB25	1140 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	GDPD5	Q8WTR4	605 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	TMX3	Q96JJ7	454 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	MTMR9	Q96QG7	549 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	LXN	Q9BS40	222 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	C17orf80	Q9BSJ5	609 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	FTHL17	Q9BXU8	183 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	TMEM60	Q9H2L4	133 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	FOXP1	Q9H334	677 aa	Predicted RBP	13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	SUGCT	Q9HAC7	445 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	RC3H2	Q9HBD1	1191 aa	Known RBP	13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	RGL1	Q9NZL6	768 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	MTCH2	Q9Y6C9	303 aa		13.2	□□□□□ -0.3
PSMC3-205	ENST00000528362	IGKV6-21	A0A0C4DH24	114 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	RPS6KA5	O75582	802 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	BAG4	O95429	457 aa	Known RBP	13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	ATP2B1	P20020	1258 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	POU3F3	P20264	500 aa	Predicted RBP	13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	MCM7	P33993	719 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	GPC3	P51654	580 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	NPEPPS	P55786	919 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	NLRP11	P59045	1033 aa	Known RBP	13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	CCDC85B	Q15834	202 aa	Predicted RBP	13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	PPM1E	Q8WY54	764 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	DYDC2	Q96IM9	177 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZNF668	Q96K58	619 aa	Predicted RBP	13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	PRDM6	Q9NQX0	595 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	ST3GAL5	Q9UNP4	418 aa		13.19	□□□□□ -0.3
PSMC3-205	ENST00000528362	COL4A6	Q14031	1691 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	ADGRA3	Q8IWK6	1321 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	PTPRS	Q13332	1948 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	GPR182	O15218	404 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	GTPBP6	O43824	516 aa	Predicted RBP	13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	LINC00271	P0C7V0	271 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	TXK	P42681	527 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	CYP4A11	Q02928	519 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	CTTN	Q14247	550 aa	Known RBP	13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	NPAS4	Q8IUM7	802 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	NOSTRIN	Q8IVI9	506 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	C4orf19	Q8IY42	314 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZNF710	Q8N1W2	664 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	MICALL1	Q8N3F8	863 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZNF579	Q8NAF0	562 aa	Known RBP	13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	IL27	Q8NEV9	243 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZNF689	Q96CS4	500 aa	Predicted RBP	13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	TTC12	Q9H892	705 aa	Predicted RBP	13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	CYP26B1	Q9NR63	512 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	PCDHA12	Q9UN75	941 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	XIRP2	A4UGR9	3374 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	SI	P14410	1827 aa		13.18	□□□□□ -0.3
PSMC3-205	ENST00000528362	REV3L	O60673	3130 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZBTB39	O15060	712 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	DKC1	O60832	514 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	MAF	O75444	373 aa	Predicted RBP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	DGKI	O75912	1065 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	DARS	P14868	501 aa	Known RBP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	EIF4B	P23588	611 aa	Known RBP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	YWHAB	P31946	246 aa	Known RBP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	DSC3	Q14574	896 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	EPC2	Q52LR7	807 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	ODR4	Q5SWX8	454 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	FBXO22	Q8NEZ5	403 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	CEP170P1	Q96L14	293 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	SCLT1	Q96NL6	688 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	ADAM2	Q99965	735 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	HSD17B14	Q9BPX1	270 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZSWIM4	Q9H7M6	989 aa		13.17	□□□□□ -0.3
PSMC3-205	ENST00000528362	GBF1	Q92538	1859 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	DENND3	A2RUS2	1198 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	POTEM	A6NI47	508 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362		C9IYK1	514 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	SLITRK3	O94933	977 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	LYPLA2	O95372	231 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	U2AF2	P26368	475 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	SARS	P49591	514 aa	Known RBP	13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	MCM2	P49736	904 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	ORC2	Q13416	577 aa	Predicted RBP	13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	ZNF174	Q15697	407 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	TTC38	Q5R3I4	469 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	TPH2	Q8IWU9	490 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	TMEM192	Q8IY95	271 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	FIBCD1	Q8N539	461 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms