RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 KLHL29Q96CT2 875 aa7.76□□□□□ -1.17
CTNND1-218ENST00000528232 C10orf88Q9H8K7 445 aa7.76□□□□□ -1.17
CTNND1-218ENST00000528232 TMEM260Q9NX78 707 aa7.76□□□□□ -1.17
CTNND1-218ENST00000528232 NUB1Q9Y5A7 615 aa7.76□□□□□ -1.17
CTNND1-218ENST00000528232 TLR3O15455 904 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 MED7O43513 233 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 IFNB1P01574 187 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 USP11P51784 963 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SNAP25P60880 206 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 DALRD3Q5D0E6 543 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 RHOT2Q8IXI1 618 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 MGARPQ8TDB4 240 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ZNF341Q9BYN7 854 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SPC25Q9HBM1 224 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 PDS5AQ29RF7 1337 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 FAM170AA1A519 330 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 XPOTO43592 962 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 LRRN2O75325 713 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ECEL1O95672 775 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 CASP1P29466 404 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 FAM83BQ5T0W9 1011 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SCYL2Q6P3W7 929 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 MAP7D3Q8IWC1 876 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 PROCA1Q8NCQ7 364 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 RIOK1Q9BRS2 568 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 IFT122Q9HBG6 1241 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ADAM21Q9UKJ8 722 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ZSCAN20P17040 1043 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 KCNJ6P48051 423 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 MRPS35P82673 323 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 DHX9Q08211 1270 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 CUL1Q13616 776 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 NFIXQ14938 502 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 VPS72Q15906 364 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SLC44A4Q53GD3 710 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 NAA35Q5VZE5 725 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SLFN12LQ6IEE8 588 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SFR1Q86XK3 245 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 CRAMP1Q96RY5 1269 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 NR3C1P04150 777 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ARHGAP4P98171 946 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 CYP27A1Q02318 531 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 PLCB4Q15147 1175 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SGO2Q562F6 1265 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 RNF207Q6ZRF8 634 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 MIGA2Q7L4E1 593 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 ELOA2Q8IYF1 753 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 GUF1Q8N442 669 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 KCNQ2O43526 872 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SFSWAPQ12872 951 aaKnown RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 TRIM60Q495X7 471 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 FBXO38Q6PIJ6 1188 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 RSPH3Q86UC2 560 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 MAP3K14Q99558 947 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 IL25Q9H293 177 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 EPB41L4AQ9HCS5 686 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-218ENST00000528232 TBC1D22BQ9NU19 505 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SEL1LQ9UBV2 794 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 SHPRHQ149N8 1683 aa7.75□□□□□ -1.17
CTNND1-218ENST00000528232 JCADQ9P266 1359 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 IQCA1LA6NCM1 817 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 E7ENQ6 273 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 OCA2Q04671 838 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 PDIA5Q14554 519 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ALKBH5Q6P6C2 394 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ZC3H15Q8WU90 426 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 NDUFA13Q9P0J0 144 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 LIMA1Q9UHB6 759 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 PTPN22Q9Y2R2 807 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CD2APQ9Y5K6 639 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CNTNAP4Q9C0A0 1308 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 MEGF6O75095 1541 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 E9PMD0 336 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 MCF2LO15068 1137 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 LDHAP00338 332 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 VPS41P49754 854 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 IQCB1Q15051 598 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 MTERF2Q49AM1 385 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 NAALADL2Q58DX5 795 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 KAZNQ674X7 775 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 STAG2Q8N3U4 1231 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 KIFC3Q9BVG8 833 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CPVLQ9H3G5 476 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 KLC4Q9NSK0 619 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 LCMT1Q9UIC8 334 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 LRRC53A6NM62 1247 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CCDC188H7C350 402 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 KRT75O95678 551 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CXCR5P32302 372 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 TMED10P49755 219 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 EIF3BP55884 814 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 DPYDQ12882 1025 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 KNOP1Q1ED39 458 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 QRICH1Q2TAL8 776 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms