RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 ST3GAL5Q9UNP4 418 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 AKT3Q9Y243 479 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 NCOR1O75376 2440 aa13.1□□□□□ -0.31
HIF3A-209ENST00000525854 GPR32O75388 356 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 CLCN3P51790 818 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 TBC1D8BQ0IIM8 1120 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 UGCGQ16739 394 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 SLC24A5Q71RS6 500 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 BANK1Q8NDB2 785 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 PPP1R16BQ96T49 567 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 OSMRQ99650 979 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 ADAM2Q99965 735 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
HIF3A-209ENST00000525854 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
HIF3A-209ENST00000525854 UBE2ZQ9H832 354 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-209ENST00000525854 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
HIF3A-209ENST00000525854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-209ENST00000525854 TBX3O15119 743 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 NCK2O43639 380 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 SLC37A4O43826 429 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 MARCH6O60337 910 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
HIF3A-209ENST00000525854 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 DNM2P50570 870 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 NEK4P51957 841 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 NLRP11P59045 1033 aaKnown RBP13.08□□□□□ -0.32
HIF3A-209ENST00000525854 PSMC5P62195 406 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
HIF3A-209ENST00000525854 PIK3AP1Q6ZUJ8 805 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 FAM228AQ86W67 206 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 LRRC71Q8N4P6 559 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 NECAB1Q8N987 351 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 P2RX5Q93086 422 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 KCNMB3Q9NPA1 279 aa13.08□□□□□ -0.32
HIF3A-209ENST00000525854 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.32
HIF3A-209ENST00000525854 MRPL42Q9Y6G3 142 aaKnown RBP13.08□□□□□ -0.32
HIF3A-209ENST00000525854 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 C9IYK1 514 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 MGEA5O60502 916 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 FDPSP14324 419 aaKnown RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 EIF4BP23588 611 aaKnown RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 KRT2P35908 639 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 PPP2R5CQ13362 524 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 ME3Q16798 604 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 LEXMQ3ZCV2 418 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 OXER1Q8TDS5 423 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 JPH2Q9BR39 696 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 ADAMTS10Q9H324 1103 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
HIF3A-209ENST00000525854 ATP6V0A4Q9HBG4 840 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
HIF3A-209ENST00000525854 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 GRM6O15303 877 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
HIF3A-209ENST00000525854 MMP1P03956 469 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-209ENST00000525854 KCNA5P22460 613 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 QARSP47897 775 aaKnown RBP13.06□□□□□ -0.32
HIF3A-209ENST00000525854 GPC3P51654 580 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 FAM189BP81408 668 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 TRIM29Q14134 588 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
HIF3A-209ENST00000525854 MTERF2Q49AM1 385 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 TCEAL5Q5H9L2 206 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
HIF3A-209ENST00000525854 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 VAV3Q9UKW4 847 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 PLAGL2Q9UPG8 496 aa13.06□□□□□ -0.32
HIF3A-209ENST00000525854 IGKV6-21A0A0C4DH24 114 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 TBKBP1A7MCY6 615 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 HOXA2O43364 376 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 STBD1O95210 358 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 LARGE1O95461 756 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 P4HBP07237 508 aaKnown RBP13.05□□□□□ -0.32
HIF3A-209ENST00000525854 DARSP14868 501 aaKnown RBP13.05□□□□□ -0.32
HIF3A-209ENST00000525854 DSC3Q14574 896 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
HIF3A-209ENST00000525854 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
HIF3A-209ENST00000525854 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-209ENST00000525854 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms