RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RGL1Q9NZL6 768 aa14.43□□□□□ -0.1
TRAPPC4-205ENST00000525079 WRAP73Q9P2S5 460 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-205ENST00000525079 P4HBP07237 508 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 TMOD1P28289 359 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 MCM7P33993 719 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 TXKP42681 527 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 QARSP47897 775 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 CRYBB1P53674 252 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 GRB10Q13322 594 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 DRP2Q13474 957 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 CTTNQ14247 550 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 EPHA7Q15375 998 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 CALCRLQ16602 461 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 ANO5Q75V66 913 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 FBXO18Q8NFZ0 1043 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 TGS1Q96RS0 853 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 CEP89Q96ST8 783 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 C17orf80Q9BSJ5 609 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 ERVK-5Q9HDB9 667 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 PCDHA12Q9UN75 941 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 ST3GAL5Q9UNP4 418 aa14.42□□□□□ -0.1
TRAPPC4-205ENST00000525079 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 COL6A3P12111 3177 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 MGEA5O60502 916 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 NEMFO60524 1076 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 NPEPPSP55786 919 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 ERVK-21P61565 698 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 CYP4A11Q02928 519 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 SPIRE1Q08AE8 756 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 ZNF174Q15697 407 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 SP7Q8TDD2 431 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 GDPD5Q8WTR4 605 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 FTHL17Q9BXU8 183 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 TMEM60Q9H2L4 133 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 ADAMTS10Q9H324 1103 aa14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 TTC12Q9H892 705 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-205ENST00000525079 COL4A4P53420 1690 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 ZBTB39O15060 712 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 GPR182O15218 404 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 LPXNO60711 386 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 FGFR4P22455 802 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 FAM228AQ86W67 206 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 TPH2Q8IWU9 490 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 CEP170P1Q96L14 293 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 SCLT1Q96NL6 688 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 MTMR9Q96QG7 549 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 ADAM2Q99965 735 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 LXNQ9BS40 222 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 FOXP1Q9H334 677 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 CYP26B1Q9NR63 512 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 BMP2KQ9NSY1 1161 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 MTCH2Q9Y6C9 303 aa14.4□□□□□ -0.1
TRAPPC4-205ENST00000525079 A0A087WWV3 80 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 GTPBP6O43824 516 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 DKC1O60832 514 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 MAFO75444 373 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 CSDE1O75534 798 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 SLITRK3O94933 977 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 GATMP50440 423 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 GPC3P51654 580 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 NBR1Q14596 966 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 FIBCD1Q8N539 461 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 FBXO22Q8NEZ5 403 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 NLRP7Q8WX94 980 aa14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 EIF2AK1Q9BQI3 630 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 TSPYL2Q9H2G4 693 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 SUCLA2Q9P2R7 463 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-205ENST00000525079 IGKV6-21A0A0C4DH24 114 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 DENND3A2RUS2 1198 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 DGKIO75912 1065 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 YWHABP31946 246 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 DNM2P50570 870 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 BTG3Q14201 252 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 PAN2Q504Q3 1202 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 EPC2Q52LR7 807 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 XKR9Q5GH70 373 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 TTC38Q5R3I4 469 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 ODR4Q5SWX8 454 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 RHPN2Q8IUC4 686 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 NPAS4Q8IUM7 802 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 KSR1Q8IVT5 923 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 C4orf19Q8IY42 314 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 ZNF689Q96CS4 500 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 ZSWIM4Q9H7M6 989 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 LRFN2Q9ULH4 789 aa14.38□□□□□ -0.11
TRAPPC4-205ENST00000525079 TTC3P53804 2025 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 CHD7Q9P2D1 2997 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 A0A087WZ62 844 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 POTEMA6NI47 508 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 DARSP14868 501 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 GJB2P29033 226 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms