RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 NACC1Q96RE7 527 aa16.88■□□□□ 0.29
SF3B2-202ENST00000524475 FTOQ9C0B1 505 aaKnown RBP eCLIP16.88■□□□□ 0.297e-6■□□□□ 10.5
SF3B2-202ENST00000524475 DBR1Q9UK59 544 aaKnown RBP16.88■□□□□ 0.29
SF3B2-202ENST00000524475 RARRES1P49788 294 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 DNM2P50570 870 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 CLCN3P51790 818 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 CRYBB1P53674 252 aaPredicted RBP16.87■□□□□ 0.29
SF3B2-202ENST00000524475 NPEPPSP55786 919 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 LPIN1Q14693 890 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 PTPAQ15257 358 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 HYIQ5T013 277 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 GPR153Q6NV75 609 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 TSHZ1Q6ZSZ6 1077 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 PHOSPHO2Q8TCD6 241 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 SEPT8Q92599 483 aa16.87■□□□□ 0.29
SF3B2-202ENST00000524475 GPR32O75388 356 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 DGAT1O75907 488 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 F13A1P00488 732 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 LONP1P36776 959 aaKnown RBP16.86■□□□□ 0.29
SF3B2-202ENST00000524475 CCT6AP40227 531 aaKnown RBP16.86■□□□□ 0.29
SF3B2-202ENST00000524475 NASPP49321 788 aaPredicted RBP16.86■□□□□ 0.29
SF3B2-202ENST00000524475 SMAD3P84022 425 aaKnown RBP16.86■□□□□ 0.29
SF3B2-202ENST00000524475 XKR9Q5GH70 373 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 LRRC71Q8N4P6 559 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 DBF4BQ8NFT6 615 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 SLC9A7Q96T83 725 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 IFIH1Q9BYX4 1025 aaKnown RBP16.86■□□□□ 0.29
SF3B2-202ENST00000524475 CXXC1Q9P0U4 656 aaPredicted RBP16.86■□□□□ 0.29
SF3B2-202ENST00000524475 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
SF3B2-202ENST00000524475 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.85■□□□□ 0.29
SF3B2-202ENST00000524475 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.85■□□□□ 0.29
SF3B2-202ENST00000524475 VWA3AA6NCI4 1184 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 ZBTB39O15060 712 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 POLGP54098 1239 aaPredicted RBP16.85■□□□□ 0.29
SF3B2-202ENST00000524475 IKBKEQ14164 716 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 ODR4Q5SWX8 454 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 POTEGQ6S5H5 508 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 ZNF579Q8NAF0 562 aaKnown RBP16.85■□□□□ 0.29
SF3B2-202ENST00000524475 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 USP28Q96RU2 1077 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 MMTAG2Q9BU76 263 aaKnown RBP16.85■□□□□ 0.29
SF3B2-202ENST00000524475 ADAMTS10Q9H324 1103 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 SUGCTQ9HAC7 445 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 AKT3Q9Y243 479 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 SLC4A7Q9Y6M7 1214 aa16.85■□□□□ 0.29
SF3B2-202ENST00000524475 BRD1O95696 1058 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 VTNP04004 478 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 GHRP10912 638 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
SF3B2-202ENST00000524475 GPC3P51654 580 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
SF3B2-202ENST00000524475 TMEM62Q0P6H9 643 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 EMC2Q15006 297 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 SLC39A14Q15043 492 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 ECM1Q16610 540 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 PIGOQ8TEQ8 1089 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
SF3B2-202ENST00000524475 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
SF3B2-202ENST00000524475 MTRQ99707 1265 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 FTHL17Q9BXU8 183 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 OSBPL7Q9BZF2 842 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 ATP6V0A4Q9HBG4 840 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 XPNPEP1Q9NQW7 623 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 SRPRBQ9Y5M8 271 aaKnown RBP16.84■□□□□ 0.29
SF3B2-202ENST00000524475 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
SF3B2-202ENST00000524475 PP2D1A8MPX8 630 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 ASAP2O43150 1006 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 EIF4BP23588 611 aaKnown RBP16.83■□□□□ 0.28
SF3B2-202ENST00000524475 NLRP11P59045 1033 aaKnown RBP16.83■□□□□ 0.28
SF3B2-202ENST00000524475 DRP2Q13474 957 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 PKP1Q13835 747 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 KIZQ2M2Z5 673 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 TCTN1Q2MV58 587 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 SPRYD3Q8NCJ5 442 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 PSPC1Q8WXF1 523 aaKnown RBP16.83■□□□□ 0.28
SF3B2-202ENST00000524475 AGO3Q9H9G7 860 aaKnown RBP16.83■□□□□ 0.28
SF3B2-202ENST00000524475 SUCLA2Q9P2R7 463 aaPredicted RBP16.83■□□□□ 0.28
SF3B2-202ENST00000524475 FBXO2Q9UK22 296 aaPredicted RBP16.83■□□□□ 0.28
SF3B2-202ENST00000524475 KIAA1024Q9UPX6 916 aa16.83■□□□□ 0.28
SF3B2-202ENST00000524475 CHD9Q3L8U1 2897 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 TMEM265A0A087WTH1 108 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 ZBBXA8MT70 800 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 SOX1O00570 391 aaPredicted RBP16.82■□□□□ 0.28
SF3B2-202ENST00000524475 YEATS4O95619 227 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 KCNJ6P48051 423 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 POU5F1BQ06416 359 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 PAK2Q13177 524 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 MXD4Q14582 209 aaPredicted RBP16.82■□□□□ 0.28
SF3B2-202ENST00000524475 LINC00301Q8NCQ3 95 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 TMEM40Q8WWA1 233 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 OSMRQ99650 979 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 584.4 ms