RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 VAV3Q9UKW4 847 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 RWDD3Q9Y3V2 267 aa19.38■□□□□ 0.69
CCNC-213ENST00000523541 COL4A4P53420 1690 aaPredicted RBP19.37■□□□□ 0.69
CCNC-213ENST00000523541 GPR32O75388 356 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 ST3GAL1Q11201 340 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 ORC2Q13416 577 aaPredicted RBP19.37■□□□□ 0.69
CCNC-213ENST00000523541 UGCGQ16739 394 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 EARS2Q5JPH6 523 aaKnown RBP19.37■□□□□ 0.69
CCNC-213ENST00000523541 CCDC83Q8IWF9 413 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 CRIPAKQ8N1N5 446 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 C8orf76Q96K31 380 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 PPP1R16BQ96T49 567 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 FOXP1Q9H334 677 aaPredicted RBP19.37■□□□□ 0.69
CCNC-213ENST00000523541 SUGCTQ9HAC7 445 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 C1orf112Q9NSG2 853 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
CCNC-213ENST00000523541 MYH9P35579 1960 aaKnown RBP19.37■□□□□ 0.69
CCNC-213ENST00000523541 COL4A6Q14031 1691 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 IGKV6-21A0A0C4DH24 114 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 STBD1O95210 358 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 NFX1Q12986 1120 aaKnown RBP19.36■□□□□ 0.69
CCNC-213ENST00000523541 OTUD6AQ7L8S5 288 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 RTN4RL1Q86UN2 441 aaPredicted RBP19.36■□□□□ 0.69
CCNC-213ENST00000523541 NPAS4Q8IUM7 802 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 C4orf19Q8IY42 314 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 FIBCD1Q8N539 461 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 FAM184AQ8NB25 1140 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 FBXO18Q8NFZ0 1043 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 ZNF689Q96CS4 500 aaPredicted RBP19.36■□□□□ 0.69
CCNC-213ENST00000523541 ERVK-5Q9HDB9 667 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 ST3GAL5Q9UNP4 418 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 KIF3AQ9Y496 699 aa19.36■□□□□ 0.69
CCNC-213ENST00000523541 SIP14410 1827 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 DDX11L8A8MPP1 907 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 DTNBO60941 627 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 MAFO75444 373 aaPredicted RBP19.35■□□□□ 0.69
CCNC-213ENST00000523541 DGKIO75912 1065 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 RB1P06400 928 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 EIF4BP23588 611 aaKnown RBP19.35■□□□□ 0.69
CCNC-213ENST00000523541 MCM2P49736 904 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 AAK1Q2M2I8 961 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 KIZQ2M2Z5 673 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 TMEM266Q2M3C6 531 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 ASB2Q96Q27 587 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 CEP89Q96ST8 783 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 RGS18Q9NS28 235 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 SEPT9Q9UHD8 586 aaPredicted RBP19.35■□□□□ 0.69
CCNC-213ENST00000523541 LRFN2Q9ULH4 789 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 AKT3Q9Y243 479 aa19.35■□□□□ 0.69
CCNC-213ENST00000523541 NOC2LQ9Y3T9 749 aaKnown RBP19.35■□□□□ 0.69
CCNC-213ENST00000523541 EML1O00423 815 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 LPXNO60711 386 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 VTNP04004 478 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 NLRP11P59045 1033 aaKnown RBP19.34■□□□□ 0.69
CCNC-213ENST00000523541 CALCRLQ16602 461 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 EPC2Q52LR7 807 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 SLC24A5Q71RS6 500 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 ANO5Q75V66 913 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 NEK9Q8TD19 979 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 CLP1Q92989 425 aaKnown RBP19.34■□□□□ 0.69
CCNC-213ENST00000523541 SCLT1Q96NL6 688 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 ADAMTS10Q9H324 1103 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 TMX1Q9H3N1 280 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 ZSWIM4Q9H7M6 989 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 CDHR5Q9HBB8 845 aa19.34■□□□□ 0.69
CCNC-213ENST00000523541 RC3H2Q9HBD1 1191 aaKnown RBP19.34■□□□□ 0.69
CCNC-213ENST00000523541 GAS2O43903 313 aaKnown RBP19.33■□□□□ 0.68
CCNC-213ENST00000523541 NEMFO60524 1076 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 CTNNB1P35222 781 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 TRAPPC10P48553 1259 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 SARSP49591 514 aaKnown RBP19.33■□□□□ 0.68
CCNC-213ENST00000523541 CLCN3P51790 818 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 FAM189BP81408 668 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 TFF2Q03403 129 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 SPIRE1Q08AE8 756 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 GPM6BQ13491 265 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 BTG3Q14201 252 aaPredicted RBP19.33■□□□□ 0.68
CCNC-213ENST00000523541 PTPROQ16827 1216 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 TMEM192Q8IY95 271 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 BANK1Q8NDB2 785 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 TMEM40Q8WWA1 233 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 MTMR9Q96QG7 549 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 OSMRQ99650 979 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 INO80BQ9C086 356 aaPredicted RBP19.33■□□□□ 0.68
CCNC-213ENST00000523541 ELAC1Q9H777 363 aaKnown RBP19.33■□□□□ 0.68
CCNC-213ENST00000523541 CYP26B1Q9NR63 512 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 PCDHB7Q9Y5E2 793 aa19.33■□□□□ 0.68
CCNC-213ENST00000523541 PRRC2BQ5JSZ5 2229 aaKnown RBP19.32■□□□□ 0.68
CCNC-213ENST00000523541 ADGRA3Q8IWK6 1321 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 DENND3A2RUS2 1198 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 C5orf67F2Z3F1 127 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 H3BNC9 293 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 LYPLA2O95372 231 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 RFC5P40937 340 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 GPC3P51654 580 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 MTERF2Q49AM1 385 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 NAALADL2Q58DX5 795 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 ZNF410Q86VK4 478 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 CMTR2Q8IYT2 770 aaKnown RBP19.32■□□□□ 0.68
CCNC-213ENST00000523541 LRRC71Q8N4P6 559 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms