RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 MAD2L2Q9UI95 211 aa6.9□□□□□ -1.3
SPIDR-216ENST00000521918 CCPG1Q9ULG6 757 aa6.9□□□□□ -1.3
SPIDR-216ENST00000521918 ISY1Q9ULR0 285 aaKnown RBP6.9□□□□□ -1.3
SPIDR-216ENST00000521918 CTDP1Q9Y5B0 961 aaPredicted RBP6.9□□□□□ -1.3
SPIDR-216ENST00000521918 DDX49Q9Y6V7 483 aaKnown RBP6.9□□□□□ -1.3
SPIDR-216ENST00000521918 CDH23Q9H251 3354 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 METTL12A8MUP2 240 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CDC45O75419 566 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 AKR1A1P14550 325 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 EDNRBP24530 442 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 GRIA4P48058 902 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 NKX3-2P78367 333 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 GHRHRQ02643 423 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 TROAPQ12815 778 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 GRM4Q14833 912 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 SNX17Q15036 470 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 LRRC41Q15345 812 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CDC37Q16543 378 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 GJC2Q5T442 439 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 IFIT1BQ5T764 474 aaKnown RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 ANO1Q5XXA6 986 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CREB3L3Q68CJ9 461 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CCSAPQ6IQ19 270 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 SLC30A10Q6XR72 485 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CCDC144CPQ8IYA2 1237 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 NCOA7Q8NI08 942 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 DDX11Q96FC9 970 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CCDC136Q96JN2 1154 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 UBAC1Q9BSL1 405 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 MTA3Q9BTC8 594 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 PLVAPQ9BX97 442 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 LACRTQ9GZZ8 138 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 UBA5Q9GZZ9 404 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 JMJD4Q9H9V9 463 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 LIN7BQ9HAP6 207 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 LY9Q9HBG7 655 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 ABCB6Q9NP58 842 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 NOP53Q9NZM5 478 aaKnown RBP6.89□□□□□ -1.31
SPIDR-216ENST00000521918 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 CNPY2Q9Y2B0 182 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 SYNRGQ9UMZ2 1314 aa6.89□□□□□ -1.31
SPIDR-216ENST00000521918 BAZ2BQ9UIF8 2168 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 LTBP2Q14767 1821 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 LOC102724159A0A0B4J2E5 919 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 MYADML2A6NDP7 307 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 SH2B2O14492 632 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 IFIT3O14879 490 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 CTAGE5O15320 804 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 CYTH3O43739 400 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 RARBP10826 455 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 EPHA1P21709 976 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 CST5P28325 142 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 CNGA1P29973 690 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 RPS6P62753 249 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 TRDNQ13061 729 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 ACVR2BQ13705 512 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 BAATQ14032 418 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 PWP2Q15269 919 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 QRICH1Q2TAL8 776 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 NSMFQ6X4W1 530 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 CHST3Q7LGC8 479 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 IL22RA1Q8N6P7 574 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 KLHDC9Q8NEP7 349 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 KCNB2Q92953 911 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 DUSP9Q99956 384 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 OSBPL7Q9BZF2 842 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 MAF1Q9H063 256 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 UPF3AQ9H1J1 476 aaKnown RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 ABHD16BQ9H3Z7 469 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 RIOX1Q9H6W3 641 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 XPNPEP3Q9NQH7 507 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 ZHX1Q9UKY1 873 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-216ENST00000521918 PNMA2Q9UL42 364 aa6.88□□□□□ -1.31
SPIDR-216ENST00000521918 ABCB11O95342 1321 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 ASB14A6NK59 587 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 KBTBD13C9JR72 458 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 KLRF2D3W0D1 207 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 TM4SF5O14894 197 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 ZBTB5O15062 677 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 PRC1O43663 620 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 DUSP11O75319 330 aaKnown RBP6.87□□□□□ -1.31
SPIDR-216ENST00000521918 PGK1P00558 417 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 COL8A1P27658 744 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 CDC27P30260 824 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 ALDH5A1P51649 535 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-216ENST00000521918 GJA9P57773 515 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 WTAPQ15007 396 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 CCDC144BQ3MJ40 725 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 USH1GQ495M9 461 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 TMEM67Q5HYA8 995 aa6.87□□□□□ -1.31
SPIDR-216ENST00000521918 HABP4Q5JVS0 413 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms