RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 BMP1P13497 986 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 SARSP49591 514 aaKnown RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 CRYBB1P53674 252 aaPredicted RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 INF2Q27J81 1249 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 LETM2Q2VYF4 491 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 NEK8Q86SG6 692 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 PPP1R16BQ96T49 567 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 LMAN2LQ9H0V9 348 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 NSUN3Q9H649 340 aaKnown RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 C1orf112Q9NSG2 853 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 NRBP2Q9NSY0 501 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 ORC3Q9UBD5 711 aaPredicted RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 LRFN2Q9ULH4 789 aa12.1□□□□□ -0.47
PVT1-209ENST00000520913 NOC2LQ9Y3T9 749 aaKnown RBP12.1□□□□□ -0.47
PVT1-209ENST00000520913 SLC37A4O43826 429 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 MGEA5O60502 916 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 GPR32O75388 356 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 BMPR1AP36894 532 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 TBC1D8BQ0IIM8 1120 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 PAN2Q504Q3 1202 aaKnown RBP12.09□□□□□ -0.47
PVT1-209ENST00000520913 EFCAB12Q6NXP0 572 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 RTN4RL1Q86UN2 441 aaPredicted RBP12.09□□□□□ -0.47
PVT1-209ENST00000520913 FAM228AQ86W67 206 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 LRRC71Q8N4P6 559 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 P2RX5Q93086 422 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 GJA10Q969M2 543 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 PLVAPQ9BX97 442 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 CDHR5Q9HBB8 845 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 RGS18Q9NS28 235 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 ST3GAL5Q9UNP4 418 aa12.09□□□□□ -0.47
PVT1-209ENST00000520913 MRPL42Q9Y6G3 142 aaKnown RBP12.09□□□□□ -0.47
PVT1-209ENST00000520913 LARGE1O95461 756 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 MMP1P03956 469 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
PVT1-209ENST00000520913 KRT2P35908 639 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 NLRP11P59045 1033 aaKnown RBP12.08□□□□□ -0.48
PVT1-209ENST00000520913 MTERF2Q49AM1 385 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 NAALADL2Q58DX5 795 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 XKR3Q5GH77 459 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 PIK3AP1Q6ZUJ8 805 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 SCLT1Q96NL6 688 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 ADAM2Q99965 735 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 KCNMB3Q9NPA1 279 aa12.08□□□□□ -0.48
PVT1-209ENST00000520913 TDRD15B5MCY1 1934 aaKnown RBP12.07□□□□□ -0.48
PVT1-209ENST00000520913 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.07□□□□□ -0.48
PVT1-209ENST00000520913 C9IYK1 514 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 TBX3O15119 743 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 CCNT1O60563 726 aaKnown RBP12.07□□□□□ -0.48
PVT1-209ENST00000520913 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.484e-8■■■■□ 20.4
PVT1-209ENST00000520913 GPC3P51654 580 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 PPP2R5CQ13362 524 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 TARBP2Q15633 366 aaKnown RBP12.07□□□□□ -0.48
PVT1-209ENST00000520913 ME3Q16798 604 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 TCEAL5Q5H9L2 206 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 SLC24A5Q71RS6 500 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 FAM20AQ96MK3 541 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 GJB4Q9NTQ9 266 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 TMEM161AQ9NX61 479 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 VAV3Q9UKW4 847 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 PCDHB7Q9Y5E2 793 aa12.07□□□□□ -0.48
PVT1-209ENST00000520913 GRM6O15303 877 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 KCNA5P22460 613 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 EIF4BP23588 611 aaKnown RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 GATMP50440 423 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 DNM2P50570 870 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 NEK4P51957 841 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 PSMC5P62195 406 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 DSC3Q14574 896 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 LEXMQ3ZCV2 418 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 NECAB1Q8N987 351 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 NSUN7Q8NE18 718 aaKnown RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 PABPC5Q96DU9 382 aaKnown RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 NECAB3Q96P71 396 aaPredicted RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 JPH2Q9BR39 696 aaPredicted RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 NIFKQ9BYG3 293 aaKnown RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 ADAMTS10Q9H324 1103 aa12.06□□□□□ -0.48
PVT1-209ENST00000520913 ELAC1Q9H777 363 aaKnown RBP12.06□□□□□ -0.48
PVT1-209ENST00000520913 TMEM150BA6NC51 233 aa12.05□□□□□ -0.48
PVT1-209ENST00000520913 TBKBP1A7MCY6 615 aa12.05□□□□□ -0.48
PVT1-209ENST00000520913 HOXA2O43364 376 aa12.05□□□□□ -0.48
PVT1-209ENST00000520913 NCK2O43639 380 aa12.05□□□□□ -0.48
PVT1-209ENST00000520913 MARCH6O60337 910 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms