RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 AMPD3Q01432 767 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 DBPQ10586 325 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 PTPROQ16827 1216 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 SLFN13Q68D06 897 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 GPR155Q7Z3F1 870 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 RALYLQ86SE5 291 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 CIR1Q86X95 450 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 DLG3Q92796 817 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 GPATCH3Q96I76 525 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZNF747Q9BV97 191 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 KATNBL1Q9H079 304 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 RIC8BQ9NVN3 520 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 TSC22D4Q9Y3Q8 395 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 COL4A3BPQ9Y5P4 624 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 B3GALT1Q9Y5Z6 326 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 H7C1D1 291 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 HIP1RO75146 1068 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 C4BPAP04003 597 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZNF888P0CJ79 500 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 BPIP17213 487 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 NCLP19338 710 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 ADCYAP1R1P41586 468 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 STRN3Q13033 797 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 REXO1L1PQ8IX06 675 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 SMC1BQ8NDV3 1235 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 CHTF18Q8WVB6 975 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 GPR101Q96P66 508 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 BRINP2Q9C0B6 783 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 KCNH7Q9NS40 1196 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 THG1LQ9NWX6 298 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 PTPN22Q9Y2R2 807 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 SLC4A7Q9Y6M7 1214 aa4.49□□□□□ -1.69
TRAPPC13-212ENST00000520525 H0Y858 1186 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 FKBP9O95302 570 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 EYA4O95677 639 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 SDHAP31040 664 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 LSSP48449 732 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 KIF11P52732 1056 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 TMEM132BQ14DG7 1078 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 SART3Q15020 963 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 R3HDM1Q15032 1099 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 CC2D1AQ6P1N0 951 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 FKBP9P1Q75LS8 142 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 KIAA1958Q8N8K9 716 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZCRB1Q8TBF4 217 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 USP7Q93009 1102 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 KLC2Q9H0B6 622 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 IFT22Q9H7X7 185 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 PCDH12Q9NPG4 1184 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 JADE2Q9NQC1 790 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 OXSMQ9NWU1 459 aa4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 H2AFY2Q9P0M6 372 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-212ENST00000520525 PRAMEF25A6NGN4 478 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 NEMP1O14524 444 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZEB2O60315 1214 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 AMHP03971 560 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 MC4RP32245 332 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 KPNA1P52294 538 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 IL2P60568 153 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 HERVK_113P62684 666 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 TOP3AQ13472 1001 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZNF174Q15697 407 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZNF585AQ6P3V2 769 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 USP51Q70EK9 711 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 DDX42Q86XP3 938 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 EFHBQ8N7U6 833 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 TTC1Q99614 292 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 PCIF1Q9H4Z3 704 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 SEC61A2Q9H9S3 476 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 SPTLC3Q9NUV7 552 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 BTBD7Q9P203 1132 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 SPO11Q9Y5K1 396 aa4.47□□□□□ -1.69
TRAPPC13-212ENST00000520525 RASSF10A6NK89 507 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 FOXP2O15409 715 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 TGM5O43548 720 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 BRINP1O60477 761 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 MPIG6BO95866 241 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 CPEP16870 476 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 SLC9A1P19634 815 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 PTGS1P23219 599 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 AOAHP28039 575 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 POLD1P28340 1107 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 ID4P47928 161 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 IL13RA1P78552 427 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 OCRLQ01968 901 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 USP10Q14694 798 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 STAT4Q14765 748 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 CATSPEREQ5SY80 951 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 ATL2Q8NHH9 583 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 Q8TCH9 128 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 GNRHR2Q96P88 292 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 ELF4Q99607 663 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 VPS11Q9H270 941 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 EMC7Q9NPA0 242 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 ACSS2Q9NR19 701 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 ARHGAP28Q9P2N2 729 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 MCM8Q9UJA3 840 aa4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 APOBEC2Q9Y235 224 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 ATP8A1Q9Y2Q0 1164 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms