RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 DSCR10P59022 87 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 RNF4P78317 190 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 MRPS35P82673 323 aaKnown RBP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 PDE4DQ08499 809 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 TP53BP2Q13625 1128 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 TWIST1Q15672 202 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 C14orf177Q52M58 125 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 PRPF40BQ6NWY9 871 aaKnown RBP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZNF549Q6P9A3 640 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 HTR3DQ70Z44 454 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 AMIGO2Q86SJ2 522 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 STPG3Q8N7X2 389 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 ACTRT2Q8TDY3 377 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 ACSF2Q96CM8 615 aaPredicted RBP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 SPRY4Q9C004 299 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 DTLQ9NZJ0 730 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 SELENONQ9NZV5 590 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 GULP1Q9UBP9 304 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 EIF2B4Q9UI10 523 aaKnown RBP-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 WNT6Q9Y6F9 365 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 AOX1Q06278 1338 aa-0.2□□□□□ -2.44
SNORA40.16-201ENST00000517238 ESYT3A0FGR9 886 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 AHRRA9YTQ3 701 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 UPK3BL1B0FP48 263 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 UPK3BL2E5RIL1 263 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 PPP6CO00743 305 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 MAN2B1O00754 1011 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 NCR1O76036 304 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 TMEM191BP0C7N4 346 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 EGR2P11161 476 aaPredicted RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 MZF1P28698 734 aaPredicted RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 TNFRSF8P28908 595 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 IRX6P78412 446 aaPredicted RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 PTPN11Q06124 597 aaPredicted RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 PDE4BQ07343 736 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 EHHADHQ08426 723 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 RESTQ13127 1097 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 TOP3AQ13472 1001 aaPredicted RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 MCM6Q14566 821 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 NAA30Q147X3 362 aaPredicted RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 DDB1Q16531 1140 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 WASHC4Q2M389 1173 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 C1QL3Q5VWW1 255 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 VASNQ6EMK4 673 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 SYT12Q8IV01 421 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 CPEB3Q8NE35 698 aaKnown RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 MICAL1Q8TDZ2 1067 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 SEC14L1Q92503 715 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 PDLIM2Q96JY6 352 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 PTCHD1Q96NR3 888 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 TMEM204Q9BSN7 226 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 MTA3Q9BTC8 594 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 PRM3Q9NNZ6 103 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 AKIP1Q9NQ31 210 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 RNF181Q9P0P0 153 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 DHX57Q6P158 1386 aaKnown RBP-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 SCN5AQ14524 2016 aa-0.21□□□□□ -2.44
SNORA40.16-201ENST00000517238 AGRNO00468 2067 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 MUC6Q6W4X9 2439 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 ITGB4P16144 1822 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZBTB7CA1YPR0 619 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 PMS2P1A4D2B8 440 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 PHGR1C9JFL3 82 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 RNASET2O00584 256 aaKnown RBP-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 NGFRP08138 427 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 FDXRP22570 491 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 FCGRTP55899 365 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 KRTAP10-10P60014 251 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 DLK1P80370 383 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 DSC3Q14574 896 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 TRIP6Q15654 476 aaKnown RBP-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 AMER1Q5JTC6 1135 aaPredicted RBP-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZNF66Q6ZN08 573 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 Q6ZNX1 250 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 NAA40Q86UY6 237 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 CNGA4Q8IV77 575 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 ELOA2Q8IYF1 753 aaPredicted RBP-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 RETREG2Q8NC44 543 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 PRSS3P2Q8NHM4 247 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 NKD2Q969F2 451 aaPredicted RBP-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 ZNF479Q96JC4 524 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 LINC00167Q96N53 147 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 TIMP4Q99727 224 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 EGFL8Q99944 293 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 SLC12A9Q9BXP2 914 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 PRSS22Q9GZN4 317 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 NPHS2Q9NP85 383 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 KCND1Q9NSA2 647 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 GFOD1Q9NXC2 390 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 TRPM5Q9NZQ8 1165 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 TRAK1Q9UPV9 953 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 CROCCQ5TZA2 2017 aa-0.22□□□□□ -2.44
SNORA40.16-201ENST00000517238 TRIP12Q14669 1992 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 PPP1R11O60927 126 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 MFAP3LO75121 409 aa-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 GADD45BO75293 160 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 CRLF1O75462 422 aa-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 IPO13O94829 963 aaKnown RBP-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 ABLIM3O94929 683 aa-0.23□□□□□ -2.45
SNORA40.16-201ENST00000517238 LATS1O95835 1130 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms