RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 Q9UFV3 132 aa6.43□□□□□ -1.38
CHD1-210ENST00000513064 NEMP1O14524 444 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 CTSWP56202 376 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 MAP3K12Q12852 859 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 STRN3Q13033 797 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 USP10Q14694 798 aaKnown RBP6.42□□□□□ -1.38
CHD1-210ENST00000513064 MYBPC3Q14896 1274 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 NFIXQ14938 502 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 ZNF827Q17R98 1081 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 UBXN11Q5T124 520 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 TIGD7Q6NT04 549 aaPredicted RBP6.42□□□□□ -1.38
CHD1-210ENST00000513064 PLEKHH3Q7Z736 793 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 FERMT3Q86UX7 667 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 IFNL2Q8IZJ0 200 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 C7orf31Q8N865 590 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 ZNF496Q96IT1 587 aaPredicted RBP6.42□□□□□ -1.38
CHD1-210ENST00000513064 USP36Q9P275 1121 aaKnown RBP6.42□□□□□ -1.38
CHD1-210ENST00000513064 CDC42EP3Q9UKI2 254 aa6.42□□□□□ -1.38
CHD1-210ENST00000513064 BRINP1O60477 761 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 B4GALT4O60513 344 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 EYA4O95677 639 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 HMGCRP04035 888 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 ZNF888P0CJ79 500 aaPredicted RBP6.41□□□□□ -1.38
CHD1-210ENST00000513064 LSP1P33241 339 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 KCNQ1P51787 676 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 NOLC1Q14978 699 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD1-210ENST00000513064 SURF1Q15526 300 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 ATP13A4Q4VNC1 1196 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 CT47A1Q5JQC4 288 aaPredicted RBP6.41□□□□□ -1.38
CHD1-210ENST00000513064 RALYLQ86SE5 291 aaKnown RBP6.41□□□□□ -1.38
CHD1-210ENST00000513064 BCL6BQ8N143 479 aaPredicted RBP6.41□□□□□ -1.38
CHD1-210ENST00000513064 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 POFUT1Q9H488 388 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 KCMF1Q9P0J7 381 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 SLC4A7Q9Y6M7 1214 aa6.41□□□□□ -1.38
CHD1-210ENST00000513064 LAMTOR5O43504 91 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 PRPF6O94906 941 aaKnown RBP6.4□□□□□ -1.38
CHD1-210ENST00000513064 EPHB4P54760 987 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 BCAR1P56945 870 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 PPP2CBP62714 309 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 PPP2CAP67775 309 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 TBC1D10BQ4KMP7 808 aaPredicted RBP6.4□□□□□ -1.38
CHD1-210ENST00000513064 BROXQ5VW32 411 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 PRAMEF9Q5VWM5 478 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 ZNF662Q6ZS27 426 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 LARP4Q71RC2 724 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD1-210ENST00000513064 GPR155Q7Z3F1 870 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 SLC5A5Q92911 643 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 MYL10Q9BUA6 226 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 SEMA4AQ9H3S1 761 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD1-210ENST00000513064 PTPN22Q9Y2R2 807 aa6.4□□□□□ -1.38
CHD1-210ENST00000513064 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.39□□□□□ -1.39
CHD1-210ENST00000513064 DNAJC6O75061 913 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 PLATP00750 562 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 POU3F3P20264 500 aaPredicted RBP6.39□□□□□ -1.39
CHD1-210ENST00000513064 ID4P47928 161 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 ADCY2Q08462 1091 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 DDB1Q16531 1140 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 KIAA1841Q6NSI8 718 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 BMP8AQ7Z5Y6 402 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 RASSF3Q86WH2 238 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 RELTQ969Z4 430 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 HAPLN2Q9GZV7 340 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 MSRAQ9UJ68 235 aa6.39□□□□□ -1.39
CHD1-210ENST00000513064 APOBEC2Q9Y235 224 aaKnown RBP6.39□□□□□ -1.39
CHD1-210ENST00000513064 ELL2O00472 640 aaPredicted RBP6.38□□□□□ -1.39
CHD1-210ENST00000513064 FOXD2O60548 495 aaPredicted RBP6.38□□□□□ -1.39
CHD1-210ENST00000513064 CNOT4O95628 575 aaKnown RBP6.38□□□□□ -1.39
CHD1-210ENST00000513064 CPEP16870 476 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 CNGA1P29973 690 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 ANTXR2P58335 489 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 NFKB2Q00653 900 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 PCOLCEQ15113 449 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 DGKDQ16760 1214 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 ZMAT1Q5H9K5 638 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 RNF187Q5TA31 235 aaPredicted RBP6.38□□□□□ -1.39
CHD1-210ENST00000513064 UNQ6494/PRO21346Q6UXR6 183 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 ARHGEF18Q6ZSZ5 1173 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 FRMD7Q6ZUT3 714 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 ESPNLQ6ZVH7 1005 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 OR5AN1Q8NGI8 311 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 RPGRQ92834 1020 aaKnown RBP6.38□□□□□ -1.39
CHD1-210ENST00000513064 RBM15Q96T37 977 aaKnown RBP eCLIP6.38□□□□□ -1.39
CHD1-210ENST00000513064 PITHD1Q9GZP4 211 aaPredicted RBP6.38□□□□□ -1.39
CHD1-210ENST00000513064 MS4A5Q9H3V2 200 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 SEC61A2Q9H9S3 476 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 DENND2AQ9ULE3 1009 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 VWA7Q9Y334 891 aa6.38□□□□□ -1.39
CHD1-210ENST00000513064 A0A0A6YYJ9 748 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 MAFGO15525 162 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 ULK1O75385 1050 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 APOL3O95236 402 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 MRE11P49959 708 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 STAT5BP51692 787 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 SESN3P58005 492 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 STAT4Q14765 748 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms