RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PTPN13Q12923 2485 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 MYH15Q9Y2K3 1946 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 MBLAC1A4D2B0 266 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-208ENST00000512813 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 CHGBP05060 677 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 TGFB3P10600 412 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 TFAP4Q01664 338 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 MTAPQ13126 283 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 GIT2Q14161 759 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 SF3A2Q15428 464 aaKnown RBP10.96□□□□□ -0.65
CLCN3-208ENST00000512813 COL28A1Q2UY09 1125 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 LARP1BQ659C4 914 aaKnown RBP10.96□□□□□ -0.65
CLCN3-208ENST00000512813 PPFIBP1Q86W92 1011 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 SLC39A11Q8N1S5 342 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 LRRC43Q8N309 656 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 C12orf50Q8NA57 414 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-208ENST00000512813 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 PUS7LQ9H0K6 701 aaKnown RBP10.96□□□□□ -0.65
CLCN3-208ENST00000512813 ZBP1Q9H171 429 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 TUBE1Q9UJT0 475 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 NEUROG3Q9Y4Z2 214 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 NOP56O00567 594 aaKnown RBP10.95□□□□□ -0.66
CLCN3-208ENST00000512813 GIPC1O14908 333 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 NCAM2O15394 837 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 ZNF806P0C7X5 589 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 FGFR1P11362 822 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 LAMP2P13473 410 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 TARSP26639 723 aaKnown RBP10.95□□□□□ -0.66
CLCN3-208ENST00000512813 GPC5P78333 572 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 PPP2R5DQ14738 602 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 USH1GQ495M9 461 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 IER5Q5VY09 327 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 TBC1D5Q92609 795 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 NELL2Q99435 816 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 TMEM117Q9H0C3 514 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 PXMP2Q9NR77 195 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 PAG1Q9NWQ8 432 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 TMEM161AQ9NX61 479 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 NUMBLQ9Y6R0 609 aa10.95□□□□□ -0.66
CLCN3-208ENST00000512813 MYO9AB2RTY4 2548 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 C9IYK1 514 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 MGEA5O60502 916 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 PLA2G2AP14555 144 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 PPFIA1Q13136 1202 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 WTAPQ15007 396 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 SLC44A4Q53GD3 710 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 CYP26C1Q6V0L0 522 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 SLC24A5Q71RS6 500 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 AUTS2Q8WXX7 1259 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 PIK3R5Q8WYR1 880 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
CLCN3-208ENST00000512813 ATP6V0A4Q9HBG4 840 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-208ENST00000512813 RGS18Q9NS28 235 aa10.94□□□□□ -0.66
CLCN3-208ENST00000512813 KDM3AQ9Y4C1 1321 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 HRO43593 1189 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 CTSAP10619 480 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 CD72P21854 359 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 CNR2P34972 360 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 NOVP48745 357 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 CLCN4P51793 760 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 FZD5Q13467 585 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 GRIK4Q16099 956 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 MARCH8Q5T0T0 291 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 VPS52Q8N1B4 723 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-208ENST00000512813 CASD1Q96PB1 797 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 ADAM2Q99965 735 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 IER2Q9BTL4 223 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 BCAS3Q9H6U6 928 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 ELAC1Q9H777 363 aaKnown RBP10.93□□□□□ -0.66
CLCN3-208ENST00000512813 IL17RBQ9NRM6 502 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 FAM217BQ9NTX9 383 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-208ENST00000512813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLCN3-208ENST00000512813 MSRB2Q9Y3D2 182 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 TICRRQ7Z2Z1 1910 aa10.93□□□□□ -0.66
CLCN3-208ENST00000512813 ABCB11O95342 1321 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 DENND3A2RUS2 1198 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 M0QZ92 97 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 HOXA2O43364 376 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 BCAR3O75815 825 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 CAPNS1P04632 268 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 HSPD1P10809 573 aaKnown RBP10.92□□□□□ -0.66
CLCN3-208ENST00000512813 POLGP54098 1239 aaPredicted RBP10.92□□□□□ -0.66
CLCN3-208ENST00000512813 FAM189BP81408 668 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 PFKPQ01813 784 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 TROAPQ12815 778 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 METTL7BQ6UX53 244 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 MCF2L2Q86YR7 1114 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 GPKOWQ92917 476 aaPredicted RBP eCLIP10.92□□□□□ -0.66
CLCN3-208ENST00000512813 TMEM169Q96HH4 297 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 PDCD2LQ9BRP1 358 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 CHRDQ9H2X0 955 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 GPCPD1Q9NPB8 672 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms