RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 RARS2Q5T160 578 aaKnown RBP18.2■□□□□ 0.5
DDR1-269ENST00000512725 FAM160B1Q5W0V3 765 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 CKAP2LQ8IYA6 745 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 KIAA0319LQ8IZA0 1049 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 ADSSL1Q8N142 457 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 METTL13Q8N6R0 699 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 RUFY2Q8WXA3 655 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 TMEM117Q9H0C3 514 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 LIMD1Q9UGP4 676 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 EVPLQ92817 2033 aa18.2■□□□□ 0.5
DDR1-269ENST00000512725 VTNP04004 478 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 ZNF76P36508 570 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 SMC1AQ14683 1233 aaKnown RBP18.19■□□□□ 0.5
DDR1-269ENST00000512725 FAM228AQ86W67 206 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 C12orf76Q8N812 135 aaPredicted RBP18.19■□□□□ 0.5
DDR1-269ENST00000512725 TDRD5Q8NAT2 981 aaKnown RBP18.19■□□□□ 0.5
DDR1-269ENST00000512725 NECTIN4Q96NY8 510 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 MAP3K14Q99558 947 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 ADAM7Q9H2U9 754 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 SPG21Q9NZD8 308 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 DBR1Q9UK59 544 aaKnown RBP18.19■□□□□ 0.5
DDR1-269ENST00000512725 HCFC2Q9Y5Z7 792 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 NFASCO94856 1347 aa18.19■□□□□ 0.5
DDR1-269ENST00000512725 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 HOXA2O43364 376 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 IGHDP01880 384 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 SMARCA1P28370 1054 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 PPM1AP35813 382 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 MTHFRP42898 656 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 ITIH3Q06033 890 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 BMS1Q14692 1282 aaKnown RBP18.18■□□□□ 0.5
DDR1-269ENST00000512725 MCTP2Q6DN12 878 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 PDXDC2PQ6P474 469 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 LRRC55Q6ZSA7 311 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 LRRC43Q8N309 656 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 SPTBN4Q9H254 2564 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 VPS13AQ96RL7 3174 aa18.18■□□□□ 0.5
DDR1-269ENST00000512725 PRC1O43663 620 aa18.17■□□□□ 0.5
DDR1-269ENST00000512725 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
DDR1-269ENST00000512725 SLC26A2P50443 739 aa18.17■□□□□ 0.5
DDR1-269ENST00000512725 CRYBB1P53674 252 aaPredicted RBP18.17■□□□□ 0.5
DDR1-269ENST00000512725 ITGB3BPQ13352 177 aaPredicted RBP18.17■□□□□ 0.5
DDR1-269ENST00000512725 ZNF484Q5JVG2 852 aa18.17■□□□□ 0.5
DDR1-269ENST00000512725 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
DDR1-269ENST00000512725 ERMP1Q7Z2K6 904 aa18.17■□□□□ 0.5
DDR1-269ENST00000512725 MB21D2Q8IYB1 491 aaPredicted RBP18.17■□□□□ 0.5
DDR1-269ENST00000512725 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
DDR1-269ENST00000512725 AGO4Q9HCK5 861 aaKnown RBP18.17■□□□□ 0.5
DDR1-269ENST00000512725 ZNF302Q9NR11 478 aa18.17■□□□□ 0.5
DDR1-269ENST00000512725 NT5C1B-RDH14C9J2C7 533 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 CLASP2O75122 1294 aaKnown RBP18.16■□□□□ 0.5
DDR1-269ENST00000512725 CXCL14O95715 111 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 METAP2P50579 478 aaKnown RBP eCLIP18.16■□□□□ 0.53e-6■■■■□ 25.7
DDR1-269ENST00000512725 FAM189BP81408 668 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 SWSAP1Q6NVH7 229 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 KCNG4Q8TDN1 519 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 ZNF668Q96K58 619 aaPredicted RBP18.16■□□□□ 0.5
DDR1-269ENST00000512725 TCEAL9Q9UHQ7 104 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 AKT3Q9Y243 479 aa18.16■□□□□ 0.5
DDR1-269ENST00000512725 DMDP11532 3685 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.15■□□□□ 0.5
DDR1-269ENST00000512725 C2orf71A6NGG8 1288 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 STK25O00506 426 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 NAPAP54920 295 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 CEP55Q53EZ4 464 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 ATAT1Q5SQI0 421 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 MIS18BP1Q6P0N0 1132 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 CCDC60Q8IWA6 550 aaPredicted RBP18.15■□□□□ 0.5
DDR1-269ENST00000512725 MRPL43Q8N983 215 aaKnown RBP18.15■□□□□ 0.5
DDR1-269ENST00000512725 SCLT1Q96NL6 688 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 COL1A2P08123 1366 aa18.15■□□□□ 0.5
DDR1-269ENST00000512725 ATG7O95352 703 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 CCNE2O96020 404 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 CALM1P0DP23 149 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 CALM2P0DP24 149 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 CALM3P0DP25 149 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 CLCN3P51790 818 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 CLCN5P51795 746 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 DSC3Q14574 896 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 ABHD15Q6UXT9 468 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 FAM43BQ6ZT52 329 aaPredicted RBP18.14■□□□□ 0.49
DDR1-269ENST00000512725 TMTC2Q8N394 836 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 PLCD3Q8N3E9 789 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 HELQQ8TDG4 1101 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 AUTS2Q8WXX7 1259 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 ANO3Q9BYT9 981 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 RNF19AQ9NV58 838 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 FBXL21Q9UKT6 434 aa18.14■□□□□ 0.49
DDR1-269ENST00000512725 RIF1Q5UIP0 2472 aaKnown RBP18.13■□□□□ 0.49
DDR1-269ENST00000512725 GPR32O75388 356 aa18.13■□□□□ 0.49
DDR1-269ENST00000512725 C22orf31O95567 290 aa18.13■□□□□ 0.49
DDR1-269ENST00000512725 ALDH7A1P49419 539 aaKnown RBP18.13■□□□□ 0.49
DDR1-269ENST00000512725 NLRP11P59045 1033 aaKnown RBP18.13■□□□□ 0.49
DDR1-269ENST00000512725 ECHDC2Q86YB7 292 aa18.13■□□□□ 0.49
DDR1-269ENST00000512725 VPS52Q8N1B4 723 aa18.13■□□□□ 0.49
DDR1-269ENST00000512725 TMEM169Q96HH4 297 aa18.13■□□□□ 0.49
DDR1-269ENST00000512725 MAP7D2Q96T17 732 aa18.13■□□□□ 0.49
DDR1-269ENST00000512725 SLC12A7Q9Y666 1083 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms