RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 INHBBP09529 407 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 SRGNP10124 158 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 PLS3P13797 630 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 AFF3P51826 1226 aaKnown RBP7.5□□□□□ -1.21
GYPB-212ENST00000511198 ARID5AQ03989 594 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
GYPB-212ENST00000511198 CNKSR3Q6P9H4 555 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 TMEM151BQ8IW70 566 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 LZTR1Q8N653 840 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 RXFP1Q9HBX9 757 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
GYPB-212ENST00000511198 TBX1O43435 398 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 SUSD5O60279 629 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 THBDP07204 575 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
GYPB-212ENST00000511198 PRR5LQ6MZQ0 368 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 C2orf69Q8N8R5 385 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 PPP1R14AQ96A00 147 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 ZNF333Q96JL9 665 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 KCNC2Q96PR1 638 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 NARFQ9UHQ1 456 aa7.49□□□□□ -1.21
GYPB-212ENST00000511198 TRIM13O60858 407 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 DDAH1O94760 285 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 ITGAVP06756 1048 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 ATF2P15336 505 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 BMP7P18075 431 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 TM4SF4P48230 202 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 CAP1Q01518 475 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 FXNQ16595 210 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 SLC43A3Q8NBI5 491 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 NPLOC4Q8TAT6 608 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 FRS2Q8WU20 508 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 JDP2Q8WYK2 163 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 GMLQ99445 158 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 MPHOSPH9Q99550 1183 aa7.48□□□□□ -1.21
GYPB-212ENST00000511198 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.48□□□□□ -1.21
GYPB-212ENST00000511198 SBNO2Q9Y2G9 1366 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 ARNTLO00327 626 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 NPHS1O60500 1241 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 DNAJA1P31689 397 aaKnown RBP7.47□□□□□ -1.21
GYPB-212ENST00000511198 LIMS1P48059 325 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 TARBP2Q15633 366 aaKnown RBP7.47□□□□□ -1.21
GYPB-212ENST00000511198 INF2Q27J81 1249 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 SV2CQ496J9 727 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 CABP7Q86V35 215 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 ZNF227Q86WZ6 799 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 RTKN2Q8IZC4 609 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 NETO2Q8NC67 525 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 PLEKHO2Q8TD55 490 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 BTN2A2Q8WVV5 523 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 TSPAN17Q96FV3 270 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 MASTLQ96GX5 879 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 PWWP2AQ96N64 755 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 PCGF6Q9BYE7 350 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 PARD6AQ9NPB6 346 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 DBR1Q9UK59 544 aaKnown RBP7.47□□□□□ -1.21
GYPB-212ENST00000511198 SOS1Q07889 1333 aaPredicted RBP7.47□□□□□ -1.21
GYPB-212ENST00000511198 ANKRD26Q9UPS8 1709 aa7.47□□□□□ -1.21
GYPB-212ENST00000511198 SNED1Q8TER0 1413 aa7.46□□□□□ -1.21
GYPB-212ENST00000511198 GJB6O95452 261 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 CAPNS1P04632 268 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 ASGR2P07307 311 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 PFKLP17858 780 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 HOXA5P20719 270 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 AMPHP49418 695 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 VMACQ2NL98 169 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 SLC4A8Q2Y0W8 1093 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 LRIT3Q3SXY7 679 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 UBE2Q1Q7Z7E8 422 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 KREMEN2Q8NCW0 462 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 P2RX7Q99572 595 aaKnown RBP7.46□□□□□ -1.22
GYPB-212ENST00000511198 RNF38Q9H0F5 515 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 BCAS3Q9H6U6 928 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 PKD1L2Q7Z442 2459 aa7.46□□□□□ -1.22
GYPB-212ENST00000511198 CENPJQ9HC77 1338 aaPredicted RBP7.46□□□□□ -1.22
GYPB-212ENST00000511198 CACNA1GO43497 2377 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 TJP1Q07157 1748 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 SHTN1A0MZ66 631 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 ADM5C9JUS6 153 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 FUCA1P04066 466 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 SCG5P05408 212 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 NCAM1P13591 858 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 HOXC12P31275 282 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 SF1Q15637 639 aaKnown RBP7.45□□□□□ -1.22
GYPB-212ENST00000511198 WWC2Q6AWC2 1192 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 LILRA6Q6PI73 481 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 CCDC103Q8IW40 242 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 TP53I13Q8NBR0 393 aaPredicted RBP7.45□□□□□ -1.22
GYPB-212ENST00000511198 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 TMEFF2Q9UIK5 374 aaPredicted RBP7.45□□□□□ -1.22
GYPB-212ENST00000511198 NR2E3Q9Y5X4 410 aa7.45□□□□□ -1.22
GYPB-212ENST00000511198 MUC6Q6W4X9 2439 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 POLR2AP24928 1970 aaKnown RBP7.44□□□□□ -1.22
GYPB-212ENST00000511198 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
GYPB-212ENST00000511198 NTRK1P04629 796 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 PHKG2P15735 406 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 MC3RP41968 323 aa7.44□□□□□ -1.22
GYPB-212ENST00000511198 GMPSP49915 693 aaPredicted RBP7.44□□□□□ -1.22
GYPB-212ENST00000511198 FOXO4P98177 505 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms