RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 NLGN4XQ8N0W4 816 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 FBXW5Q969U6 566 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 ADOQ96SZ5 270 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 MLH3Q9UHC1 1453 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 RNF17Q9BXT8 1623 aaKnown RBP9.97□□□□□ -0.81
USP53-206ENST00000510737 ZNF561-AS1K7EIQ3 104 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 KRT15P19012 456 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 LARP4Q71RC2 724 aaKnown RBP eCLIP9.97□□□□□ -0.81
USP53-206ENST00000510737 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
USP53-206ENST00000510737 SMURF1Q9HCE7 757 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 CATSPERZQ9NTU4 200 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 OAZ3Q9UMX2 235 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 PCDHA9Q9Y5H5 950 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 ATP23Q9Y6H3 246 aa9.97□□□□□ -0.81
USP53-206ENST00000510737 POLR1AO95602 1720 aaPredicted RBP9.96□□□□□ -0.81
USP53-206ENST00000510737 CUTAO60888 179 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 MPIG6BO95866 241 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 FAM153BP0C7A2 387 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 SRGAP2CP0DJJ0 459 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 RAC3P60763 192 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 GUCY1A3Q02108 690 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 RASGRF1Q13972 1273 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 PRKD1Q15139 912 aaPredicted RBP9.96□□□□□ -0.82
USP53-206ENST00000510737 FIGNQ5HY92 759 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 C16orf59Q7L2K0 433 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 ARHGAP28Q9P2N2 729 aa9.96□□□□□ -0.82
USP53-206ENST00000510737 PTGS1P23219 599 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 AOAHP28039 575 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 ADCY8P40145 1251 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 ETV4P43268 484 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
USP53-206ENST00000510737 TM4SF20Q53R12 229 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 FSTL4Q6MZW2 842 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 CDC6Q99741 560 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 AMNQ9BXJ7 453 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 KIAA1683Q9H0B3 1180 aa9.95□□□□□ -0.82
USP53-206ENST00000510737 RAD17O75943 681 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 CR2P20023 1033 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 COMTP21964 271 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 SSRP1Q08945 709 aaKnown RBP9.94□□□□□ -0.82
USP53-206ENST00000510737 FOXE3Q13461 319 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 WDR72Q3MJ13 1102 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 MTERF2Q49AM1 385 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 HS1BP3Q53T59 392 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 DPP8Q6V1X1 898 aaPredicted RBP9.94□□□□□ -0.82
USP53-206ENST00000510737 RNF207Q6ZRF8 634 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 CFHR4Q92496 578 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 EDAQ92838 391 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
USP53-206ENST00000510737 CCDC9Q9Y3X0 531 aaKnown RBP9.94□□□□□ -0.82
USP53-206ENST00000510737 CCDC85CA6NKD9 419 aa9.93□□□□□ -0.82
USP53-206ENST00000510737 STK10O94804 968 aaKnown RBP9.93□□□□□ -0.82
USP53-206ENST00000510737 RBM25P49756 843 aaKnown RBP9.93□□□□□ -0.82
USP53-206ENST00000510737 STILQ15468 1287 aa9.93□□□□□ -0.82
USP53-206ENST00000510737 LRSAM1Q6UWE0 723 aa9.93□□□□□ -0.82
USP53-206ENST00000510737 EXTL1Q92935 676 aa9.93□□□□□ -0.82
USP53-206ENST00000510737 ZNF503Q96F45 646 aa9.93□□□□□ -0.82
USP53-206ENST00000510737 GALNT8Q9NY28 637 aa9.93□□□□□ -0.82
USP53-206ENST00000510737 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
USP53-206ENST00000510737 SYNMO15061 1565 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 CDK13Q14004 1512 aaKnown RBP9.92□□□□□ -0.82
USP53-206ENST00000510737 CCDC66A2RUB6 948 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 NPIPB8E9PQR5 432 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 CRTAMO95727 393 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 KCNQ1P51787 676 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 MIIPQ5JXC2 388 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 CKAP2LQ8IYA6 745 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 CDC42EP3Q9UKI2 254 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 SLC30A1Q9Y6M5 507 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 MYO5CQ9NQX4 1742 aa9.92□□□□□ -0.82
USP53-206ENST00000510737 STRCP1A6NGW2 1772 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
USP53-206ENST00000510737 GJA4P35212 333 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 ZNF568Q3ZCX4 644 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 USP39Q53GS9 565 aaKnown RBP9.91□□□□□ -0.82
USP53-206ENST00000510737 WNK4Q96J92 1243 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 MENTQ9BUN1 341 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 PLA2G12BQ9BX93 195 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 ZNF341Q9BYN7 854 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 NR2E1Q9Y466 385 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 LRRC7Q96NW7 1537 aa9.91□□□□□ -0.82
USP53-206ENST00000510737 PRAMEF25A6NGN4 478 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 CDC14BO60729 498 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 CLASP2O75122 1294 aaKnown RBP9.9□□□□□ -0.82
USP53-206ENST00000510737 DNM2P50570 870 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 GABREP78334 506 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 DGCR2P98153 550 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 NFYCQ13952 458 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 ZMAT1Q5H9K5 638 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 GGT6Q6P531 493 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 UCKL1Q9NWZ5 548 aa9.9□□□□□ -0.82
USP53-206ENST00000510737 A2ML1A8K2U0 1454 aa9.9□□□□□ -0.83
USP53-206ENST00000510737 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.83
USP53-206ENST00000510737 ARHGAP5Q13017 1502 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 HMGCRP04035 888 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 ST5P78524 1137 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms