RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PCNX4Q63HM2 1172 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 SNRNP48Q6IEG0 339 aaKnown RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 B3GNT9Q6UX72 402 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 CREG2Q8IUH2 290 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 REPS2Q8NFH8 660 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 C12orf42Q96LP6 360 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 FAM107BQ9H098 131 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 RNF146Q9NTX7 359 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 ZNF214Q9UL59 606 aaPredicted RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 MACROD2A1Z1Q3 448 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 EYA4O95677 639 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 MAGEA1P43355 309 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 C1QTNF8P60827 252 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 FKBP3Q00688 224 aaKnown RBP12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 MTMR1Q13613 665 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 PGM5Q15124 567 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 ALS2CLQ60I27 953 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 EMBQ6PCB8 327 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 GBP6Q6ZN66 633 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 SRLQ86TD4 932 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 BANK1Q8NDB2 785 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 CEP63Q96MT8 703 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 NOX5Q96PH1 765 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 RMDN3Q96TC7 470 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 LXNQ9BS40 222 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 SELENOOQ9BVL4 669 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 TEKT3Q9BXF9 490 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 MMRN2Q9H8L6 949 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 TUFT1Q9NNX1 390 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 ADARB2Q9NS39 739 aaKnown RBP12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 ARHGAP20Q9P2F6 1191 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 AFG3L2Q9Y4W6 797 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 SNCAIPQ9Y6H5 919 aa12.07□□□□□ -0.48
SH3RF1-203ENST00000508685 SFI1A8K8P3 1242 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 DHX15O43143 795 aaKnown RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 BCRP11274 1271 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 MYCLP12524 364 aaPredicted RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 EIF4A3P38919 411 aaKnown RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 CYP27A1Q02318 531 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 NNTQ13423 1086 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 BAATQ14032 418 aaPredicted RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 NOL9Q5SY16 702 aaKnown RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 CCDC181Q5TID7 509 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 RINT1Q6NUQ1 792 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 CACNA2D4Q7Z3S7 1137 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 KRT26Q7Z3Y9 468 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 RIT2Q99578 217 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 RASSF4Q9H2L5 321 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 KCTD10Q9H3F6 313 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 UBIAD1Q9Y5Z9 338 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 FRMPD4Q14CM0 1322 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 GOLGA6BA6NDN3 693 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 GOLGA8KD6RF30 607 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 TRAF5O00463 557 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 ZNF263O14978 683 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 PPFIA4O75335 1185 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 MYBP10242 640 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 DSG3P32926 999 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 EPHB4P54760 987 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 COG2Q14746 738 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 PDXDC1Q6P996 788 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 SPATA4Q8NEY3 305 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 OSBPL9Q96SU4 736 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 PDCD2LQ9BRP1 358 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 AGO4Q9HCK5 861 aaKnown RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 PXMP2Q9NR77 195 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 CEP72Q9P209 647 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 FEZ2Q9UHY8 353 aaPredicted RBP12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
SH3RF1-203ENST00000508685 MYO1CO00159 1063 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 PEX10O60683 326 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 TBCAO75347 108 aaKnown RBP12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 SERPING1P05155 500 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 HOXD13P35453 343 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 APBA1Q02410 837 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 PPFIA1Q13136 1202 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 ASTE1Q2TB18 679 aaPredicted RBP12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 CFAP221Q4G0U5 840 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 RRAGAQ7L523 313 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 FAM76AQ8TAV0 307 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 MAP3K20Q9NYL2 800 aaKnown RBP12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 RRP15Q9Y3B9 282 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms