RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ERICH2A1L162 156 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 MEIS3P2A8K0S8 358 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 YDJCA8MPS7 323 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SPATA31C2B4DYI2 1134 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PRKAB2O43741 272 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PFKFB2O60825 505 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 TP53P04637 393 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SSR1P43307 286 aaKnown RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 FOXC1Q12948 553 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 TOB2Q14106 344 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 Q6ZUG5 572 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SGMS1Q86VZ5 419 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PPFIBP1Q86W92 1011 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 COL4A5P29400 1685 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 WDR90Q96KV7 1748 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SIPA1L1O43166 1804 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 MYH6P13533 1939 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 ZBTB42B2RXF5 422 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 NBNO60934 754 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 HIP1RO75146 1068 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 MYL3P08590 195 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 GPC1P35052 558 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 CCINQ13939 588 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 TOMM20Q15388 145 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SF1Q15637 639 aaKnown RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 GRIK5Q16478 980 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 ACBD5Q5T8D3 534 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 CCDC70Q6NSX1 233 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PDZD3Q86UT5 571 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SLC51AQ86UW1 340 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 TBC1D10CQ8IV04 446 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PASD1Q8IV76 773 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 CBARPQ8N350 705 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 SDR42E1Q8WUS8 393 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 ANKS1AQ92625 1134 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 AS3MTQ9HBK9 375 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 TIMMDC1Q9NPL8 285 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 TMOD2Q9NZR1 351 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 FNIP2Q9P278 1114 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 HACL1Q9UJ83 578 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
CLCN3-206ENST00000507875 PLIN4Q96Q06 1357 aa8.03□□□□□ -1.12
CLCN3-206ENST00000507875 MYH15Q9Y2K3 1946 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ERICH4A6NGS2 130 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SLC22A31A6NKX4 558 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 PDE2AO00408 941 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 TBX3O15119 743 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 MT-CO1P00395 513 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 HLA-DOAP06340 250 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 CALM1P0DP23 149 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 CALM2P0DP24 149 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 CALM3P0DP25 149 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 PDCP20941 246 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF280AP59817 542 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF252P-AS1Q0IIN9 211 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 FNDC3BQ53EP0 1204 aaKnown RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 WIPI1Q5MNZ9 446 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 APOBEC3HQ6NTF7 200 aaKnown RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 LDHDQ86WU2 507 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 IQCA1Q86XH1 822 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SUGP1Q8IWZ8 645 aaKnown RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF669Q96BR6 464 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 MAP3K14Q99558 947 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 MCM9Q9NXL9 1143 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SYNPO2Q9UMS6 1093 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 FLT1P17948 1338 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ATRNL1Q5VV63 1379 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF891A8MT65 544 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SH2B2O14492 632 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 VDRP11473 427 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 CPA1P15085 419 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 RAG1P15918 1043 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 NME2P22392 152 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 FLT3P36888 993 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 HMGN5P82970 282 aaKnown RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ODF1Q14990 250 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 LONRF2Q1L5Z9 754 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SYDE2Q5VT97 1194 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 CDC42EP5Q6NZY7 148 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SYNE3Q6ZMZ3 975 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 PLPPR2Q96GM1 343 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SLC30A3Q99726 388 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 TAF1DQ9H5J8 278 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-206ENST00000507875 GRPEL1Q9HAV7 217 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 SUSD2Q9UGT4 822 aa8.02□□□□□ -1.13
CLCN3-206ENST00000507875 CEP350Q5VT06 3117 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 SCN4AP35499 1836 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 WDR33Q9C0J8 1336 aaKnown RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF541Q9H0D2 1346 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 PSMD14O00487 310 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 MYO1BO43795 1136 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 EPHX1P07099 455 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 NME1P15531 152 aaKnown RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 HAND2P61296 217 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 ZBED6P86452 979 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 GFOD2Q3B7J2 385 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms