RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CTRB2Q6GPI1 263 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 HDXQ7Z353 690 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MAGEB6Q8N7X4 407 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MGARPQ8TDB4 240 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MXD3Q9BW11 206 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 FTOQ9C0B1 505 aaKnown RBP eCLIP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MVB12BQ9H7P6 319 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 EPB41L4AQ9HCS5 686 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 HELLSQ9NRZ9 838 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 AATFQ9NY61 560 aaKnown RBP eCLIP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PGAP2Q9UHJ9 254 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 KCNH3Q9ULD8 1083 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CTNND2Q9UQB3 1225 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PRELID1Q9Y255 219 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ATP6V0A2Q9Y487 856 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 V9GY48 417 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 USP34Q70CQ2 3546 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TNFRSF10AO00220 468 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 HDAC3O15379 428 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TBCAO75347 108 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 OXSR1O95747 527 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TSPY3P0CV98 308 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TSPY8P0CW00 308 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 GSPT1P15170 499 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 PLCG2P16885 1265 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TBXAS1P24557 533 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 KIF5BP33176 963 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ETV3P41162 512 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CD300CQ08708 224 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TAF1CQ15572 869 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TRAPPC3LQ5T215 181 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 KCTD16Q68DU8 428 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 USP50Q70EL3 339 aaPredicted RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 RTL10Q7L3V2 364 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 DYMQ7RTS9 669 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TTC6Q86TZ1 520 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 AFAP1L1Q8TED9 768 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ESR2Q92731 530 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NAF1Q96HR8 494 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 INTS4Q96HW7 963 aaKnown RBP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 MCM9Q9NXL9 1143 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CLIC5Q9NZA1 410 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 HMGXB4Q9UGU5 601 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 NIP7Q9Y221 180 aaKnown RBP eCLIP3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 TELO2Q9Y4R8 837 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 CAPN7Q9Y6W3 813 aa3.98□□□□□ -1.77
PCDH11X-208ENST00000504220 ITIH6Q6UXX5 1313 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 MYH14Q7Z406 1995 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CNTRLQ7Z7A1 2325 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ARFGEF1Q9Y6D6 1849 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 MEFVO15553 781 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ADAMTS4O75173 837 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ATP6V1G2O95670 118 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TFRCP02786 760 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PCK1P35558 622 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 RXRGP48443 463 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CCT5P48643 541 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CTCFP49711 727 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 VPS41P49754 854 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 HSD17B7P56937 341 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 EIF4A1P60842 406 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PTH1RQ03431 593 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 RELAQ04206 551 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SPAG1Q07617 926 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 LSAMPQ13449 338 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PNOCQ13519 176 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PPP2R5DQ14738 602 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 EZH2Q15910 746 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 USH1GQ495M9 461 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CMPK2Q5EBM0 449 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SIGIRRQ6IA17 410 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 KSR2Q6VAB6 950 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF600Q6ZNG1 722 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 RFPL4BQ6ZWI9 263 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TMTC1Q8IUR5 882 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 DIS3L2Q8IYB7 885 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CYP4X1Q8N118 509 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PROM2Q8N271 834 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TAB3Q8N5C8 712 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SPERTQ8NA61 448 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 GTF3C2Q8WUA4 911 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PPP1R13BQ96KQ4 1090 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 C8orf48Q96LL4 319 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PPP1R10Q96QC0 940 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 USP28Q96RU2 1077 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TBCBQ99426 244 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM207AQ9NSI2 230 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 STK38LQ9Y2H1 464 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ZBTB1Q9Y2K1 713 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PCDHB6Q9Y5E3 794 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 URB1O60287 2271 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 A0A088AWK7 358 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM237AA0A1B0GTK4 181 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 EFCAB8A8MWE9 144 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ABLIM1O14639 778 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ENC1O14682 589 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CEP104O60308 925 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 FGF18O76093 207 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ZBTB7AO95365 584 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PSMA3P25788 255 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms