RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 MTHFRP42898 656 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 NR2C2P49116 596 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 AARSP49588 968 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLCN3-203ENST00000502998 CYP4A11Q02928 519 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 UBXN1Q04323 297 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 CETN1Q12798 172 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 PPFIA1Q13136 1202 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 TCIRG1Q13488 830 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 PSMD6Q15008 389 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ANO4Q32M45 955 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ARL13BQ3SXY8 428 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 SLC10A5Q5PT55 438 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ZBTB41Q5SVQ8 909 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 SIGIRRQ6IA17 410 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 TBC1D9Q6ZT07 1266 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 LRRTM3Q86VH5 581 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 FAM228AQ86W67 206 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 RHOT2Q8IXI1 618 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 CCDC116Q8IYX3 515 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 SCYL3Q8IZE3 742 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 FBXO22Q8NEZ5 403 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ATL1Q8WXF7 558 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 KIFAP3Q92845 792 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 PGBD4Q96DM1 585 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 FGD4Q96M96 766 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 TUBGCP5Q96RT8 1024 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 TTC1Q99614 292 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 TUBA1CQ9BQE3 449 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 HAUS8Q9BT25 410 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 KLHL4Q9C0H6 718 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 NDEL1Q9GZM8 345 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 DNAJC25Q9H1X3 360 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 PDE11AQ9HCR9 933 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 NMRK2Q9NPI5 230 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ABCF3Q9NUQ8 709 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLCN3-203ENST00000502998 EMC3Q9P0I2 261 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 LHX6Q9UPM6 363 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ERVV-2B6SEH9 535 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 KIF28PB7ZC32 967 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 GUCY1B2O75343 617 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 TSPAN9O75954 239 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 SLC34A2O95436 690 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 MYCP01106 439 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 MYL3P08590 195 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 GSTT2P0CG29 244 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 GSTT2BP0CG30 244 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 EPB41P11171 864 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 CTRB1P17538 263 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 FUT4P22083 530 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 IL10P22301 178 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 VARSP26640 1264 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 IL13P35225 146 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 SERPINB6P35237 376 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 UBA7P41226 1012 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 MAPKAPK2P49137 400 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 USP46P62068 366 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 GABREP78334 506 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 PDE4DQ08499 809 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 KLHL30Q0D2K2 578 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ITGB3BPQ13352 177 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 XRCC4Q13426 336 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 PRKG1Q13976 671 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 GNA13Q14344 377 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ANKRD1Q15327 319 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 Q3C1V9 767 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 TRAPPC3LQ5T215 181 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 SYCP2LQ5T4T6 812 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 CTRB2Q6GPI1 263 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 OTUD7BQ6GQQ9 843 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ZNF530Q6P9A1 599 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ABRAXAS1Q6UWZ7 409 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 RAPH1Q70E73 1250 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 SH3BP5LQ7L8J4 393 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 MRPL10Q7Z7H8 261 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 NKAIN3Q8N8D7 197 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 LSMEM1Q8N8F7 131 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ANKRD53Q8N9V6 530 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 BBOF1Q8ND07 529 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 IPCEF1Q8WWN9 437 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ANKRD36BP1Q96IX9 119 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 DCAF5Q96JK2 942 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 JAKMIP1Q96N16 626 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 TSGA13Q96PP4 275 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 APBA2Q99767 749 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 NUP58Q9BVL2 599 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 FOXP3Q9BZS1 431 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 API5Q9BZZ5 524 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 B3GNT4Q9C0J1 378 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 FAM204AQ9H8W3 233 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 PSTPIP2Q9H939 334 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 PIH1D3Q9NQM4 214 aaKnown RBP7.04□□□□□ -1.28
CLCN3-203ENST00000502998 ZBTB40Q9NUA8 1239 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 MRGBPQ9NV56 204 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 RHBDL2Q9NX52 303 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 PDP2Q9P2J9 529 aa7.04□□□□□ -1.28
CLCN3-203ENST00000502998 AGO2Q9UKV8 859 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms