RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TGFB3P10600 412 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 BMP4P12644 408 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 MTHFD2P13995 350 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 IFNGR1P15260 489 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 ADD2P35612 726 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 HSPA7P48741 367 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 SEPHS1P49903 392 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 SLC5A3P53794 718 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 MRPS9P82933 396 aaKnown RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 GALNT1Q10472 559 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 PMS2P11Q13670 270 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 IFI16Q16666 785 aaKnown RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 UGT8Q16880 541 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 SLC45A4Q5BKX6 768 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 CT83Q5H943 113 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 CWF19L1Q69YN2 538 aaKnown RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 ITPRIPL1Q6GPH6 555 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 GGT6Q6P531 493 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 CDH24Q86UP0 819 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 ZSCAN30Q86W11 494 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 CXorf67Q86X51 503 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 LIX1LQ8IVB5 337 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 LSMEM1Q8N8F7 131 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 MARCH10Q8NA82 808 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 GALNT11Q8NCW6 608 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 KLHDC4Q8TBB5 520 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 EAF2Q96CJ1 260 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 PAWRQ96IZ0 340 aaKnown RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 NUDT16L1Q9BRJ7 211 aaKnown RBP7.09□□□□□ -1.27
BRCA1-224ENST00000497488 ATP6V0A4Q9HBG4 840 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 KMT5AQ9NQR1 393 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 ACSS2Q9NR19 701 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 ANKEF1Q9NU02 776 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 MINPP1Q9UNW1 487 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 AP4E1Q9UPM8 1137 aa7.09□□□□□ -1.27
BRCA1-224ENST00000497488 MEIS1O00470 390 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 IRAK2O43187 625 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 PLOD3O60568 738 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 RNGTTO60942 597 aaKnown RBP7.08□□□□□ -1.28
BRCA1-224ENST00000497488 LRRN2O75325 713 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 AMY2AP04746 511 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 KRT15P19012 456 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 AMY2BP19961 511 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 HOXD12P35452 270 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 CTSKP43235 329 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 TAF5Q15542 800 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 MPEG1Q2M385 716 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 MBNL2Q5VZF2 373 aaKnown RBP7.08□□□□□ -1.28
BRCA1-224ENST00000497488 CRTC3Q6UUV7 619 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 NOSTRINQ8IVI9 506 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 KSR1Q8IVT5 923 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC155Q8N6L0 562 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 RNF152Q8N8N0 203 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 ADAMTS18Q8TE60 1221 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 ASB12Q8WXK4 309 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 CENPIQ92674 756 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-224ENST00000497488 FCRL3Q96P31 734 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-224ENST00000497488 KCNJ15Q99712 375 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 MIPEPQ99797 713 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 CHCHD6Q9BRQ6 235 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 COLEC11Q9BWP8 271 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 SSU72Q9NP77 194 aaKnown RBP7.08□□□□□ -1.28
BRCA1-224ENST00000497488 USP36Q9P275 1121 aaKnown RBP7.08□□□□□ -1.28
BRCA1-224ENST00000497488 LIMCH1Q9UPQ0 1083 aa7.08□□□□□ -1.28
BRCA1-224ENST00000497488 FAM170AA1A519 330 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC154A6NI56 674 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 TISP43B9A030 160 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 B9A039 149 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 KCNK3O14649 394 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 PAPLNO95428 1278 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 CYP17A1P05093 508 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 POLBP06746 335 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 CLEC2LP0C7M8 214 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 EDNRBP24530 442 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 ADH6P28332 368 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 ALDH9A1P49189 494 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 MANFP55145 182 aaKnown RBP7.07□□□□□ -1.28
BRCA1-224ENST00000497488 GPR19Q15760 415 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 INF2Q27J81 1249 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 ZACNQ401N2 412 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 RCSD1Q6JBY9 416 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 DSTYKQ6XUX3 929 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 RTF1Q92541 710 aaKnown RBP7.07□□□□□ -1.28
BRCA1-224ENST00000497488 MMP19Q99542 508 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 LSM14BQ9BX40 385 aaKnown RBP7.07□□□□□ -1.28
BRCA1-224ENST00000497488 STK31Q9BXU1 1019 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 ANO3Q9BYT9 981 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 JPH1Q9HDC5 661 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-224ENST00000497488 CWC25Q9NXE8 425 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-224ENST00000497488 NKIRAS2Q9NYR9 191 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 KCNG1Q9UIX4 513 aa7.07□□□□□ -1.28
BRCA1-224ENST00000497488 KIF21AQ7Z4S6 1674 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 A0A088AWK7 358 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 A6NLC8 198 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 DDX3XO00571 662 aaKnown RBP eCLIP7.06□□□□□ -1.281e-8■■■□□ 17.6
BRCA1-224ENST00000497488 HTRA2O43464 458 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms