RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 ZNF174Q15697 407 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 AAK1Q2M2I8 961 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 HSDL1Q3SXM5 330 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 XKR3Q5GH77 459 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 ZNF484Q5JVG2 852 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 KRT79Q5XKE5 535 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 THSD4Q6ZMP0 1018 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 RSPH3Q86UC2 560 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 CCDC155Q8N6L0 562 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 SLC43A3Q8NBI5 491 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 KCNG4Q8TDN1 519 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 CNTNAP3BQ96NU0 1288 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 IPO9Q96P70 1041 aaKnown RBP6.82□□□□□ -1.32
HMGCL-206ENST00000496907 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGCL-206ENST00000496907 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 CNTNAP3Q9BZ76 1288 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 NT5C3AQ9H0P0 336 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 ZSWIM4Q9H7M6 989 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 TUFT1Q9NNX1 390 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 ZNF302Q9NR11 478 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 CHMP5Q9NZZ3 219 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 CCDC39Q9UFE4 941 aa6.82□□□□□ -1.32
HMGCL-206ENST00000496907 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
HMGCL-206ENST00000496907 MAFBQ9Y5Q3 323 aaPredicted RBP6.82□□□□□ -1.32
HMGCL-206ENST00000496907 COL11A1P12107 1806 aaPredicted RBP6.82□□□□□ -1.32
HMGCL-206ENST00000496907 GBF1Q92538 1859 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 A0A1W2PQ45 241 aaPredicted RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 A0A1W2PQY0 241 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 MED19A0JLT2 244 aaPredicted RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 KIF28PB7ZC32 967 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 HAS3O00219 553 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 DPYSL4O14531 572 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CTAGE5O15320 804 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 EDIL3O43854 480 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 GAS2O43903 313 aaKnown RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CAND2O75155 1236 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 LYPLA2O95372 231 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 F2P00734 622 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 LGALS2P05162 132 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 TMOD1P28289 359 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 UBA7P41226 1012 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 QARSP47897 775 aaKnown RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CDK7P50613 346 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 TOB1P50616 345 aaPredicted RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 BEX3Q00994 111 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 RESTQ13127 1097 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 ITGB3BPQ13352 177 aaPredicted RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 EARS2Q5JPH6 523 aaKnown RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 SWSAP1Q6NVH7 229 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 PDXDC2PQ6P474 469 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 B3GNT9Q6UX72 402 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CXCL17Q6UXB2 119 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 ERMP1Q7Z2K6 904 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 ANKRD33Q7Z3H0 272 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 C4orf19Q8IY42 314 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CKAP2LQ8IYA6 745 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 NME8Q8N427 588 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 C4orf32Q8N8J7 132 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 RETREG2Q8NC44 543 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 HAS1Q92839 578 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 COPS5Q92905 334 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CALML4Q96GE6 196 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 CCDC34Q96HJ3 373 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 C16orf70Q9BSU1 422 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 POLR3CQ9BUI4 534 aaPredicted RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 LRRC27Q9C0I9 530 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 SLC28A3Q9HAS3 691 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 ANKEF1Q9NU02 776 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 FAM86C1Q9NVL1 165 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 LRWD1Q9UFC0 647 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 MSRAQ9UJ68 235 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 PCDHB6Q9Y5E3 794 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 SRPRBQ9Y5M8 271 aaKnown RBP6.81□□□□□ -1.32
HMGCL-206ENST00000496907 COL1A2P08123 1366 aa6.81□□□□□ -1.32
HMGCL-206ENST00000496907 KDM3AQ9Y4C1 1321 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 CHD7Q9P2D1 2997 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 C17orf102A2RUQ5 167 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 ADAMTS3O15072 1205 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 SPTLC2O15270 562 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 ADCY6O43306 1168 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 SLC37A4O43826 429 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 RPA1P27694 616 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 TECP42680 631 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 NASPP49321 788 aaPredicted RBP6.8□□□□□ -1.32
HMGCL-206ENST00000496907 DNM2P50570 870 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 PPIGQ13427 754 aaKnown RBP eCLIP6.8□□□□□ -1.32
HMGCL-206ENST00000496907 BFSP2Q13515 415 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 STK38Q15208 465 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 RAB30Q15771 203 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 KIAA0753Q2KHM9 967 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 NBPF20Q3BBV1 942 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 ODR4Q5SWX8 454 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 UTP14CQ5TAP6 766 aaKnown RBP6.8□□□□□ -1.32
HMGCL-206ENST00000496907 RIF1Q5UIP0 2472 aaKnown RBP6.8□□□□□ -1.32
HMGCL-206ENST00000496907 RPAINQ86UA6 219 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
HMGCL-206ENST00000496907 IGSF22Q8N9C0 903 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms