RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PRKCEQ02156 737 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 TBC1D8BQ0IIM8 1120 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 TIGD5Q53EQ6 642 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 NAALADL2Q58DX5 795 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 PPP4R3AQ6IN85 833 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 TMEM40Q8WWA1 233 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 FAM20AQ96MK3 541 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 PPP1R16BQ96T49 567 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 OSMRQ99650 979 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 NIFKQ9BYG3 293 aaKnown RBP14.35□□□□□ -0.11
PTPRF-214ENST00000496043 UBE2ZQ9H832 354 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-214ENST00000496043 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 MARCH6O60337 910 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 MGEA5O60502 916 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 LINC00271P0C7V0 271 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 GCFC2P16383 781 aaKnown RBP14.34□□□□□ -0.11
PTPRF-214ENST00000496043 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
PTPRF-214ENST00000496043 FAM189BP81408 668 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 TARBP2Q15633 366 aaKnown RBP14.34□□□□□ -0.11
PTPRF-214ENST00000496043 UGCGQ16739 394 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 FAM228AQ86W67 206 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 LRRC71Q8N4P6 559 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 LINC01465Q8N7H1 131 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 ADAMTS10Q9H324 1103 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 NSUN3Q9H649 340 aaKnown RBP14.34□□□□□ -0.11
PTPRF-214ENST00000496043 MRPL42Q9Y6G3 142 aaKnown RBP14.34□□□□□ -0.11
PTPRF-214ENST00000496043 TTC3P53804 2025 aa14.34□□□□□ -0.11
PTPRF-214ENST00000496043 C9IYK1 514 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 GRM6O15303 877 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 NCK2O43639 380 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 CCNT1O60563 726 aaKnown RBP14.33□□□□□ -0.12
PTPRF-214ENST00000496043 DKC1O60832 514 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTPRF-214ENST00000496043 DTNBO60941 627 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 FDPSP14324 419 aaKnown RBP14.33□□□□□ -0.12
PTPRF-214ENST00000496043 ZSCAN20P17040 1043 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-214ENST00000496043 EIF4BP23588 611 aaKnown RBP14.33□□□□□ -0.12
PTPRF-214ENST00000496043 DNM2P50570 870 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 PSMC5P62195 406 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 ME3Q16798 604 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 LEXMQ3ZCV2 418 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 PAN2Q504Q3 1202 aaKnown RBP14.33□□□□□ -0.12
PTPRF-214ENST00000496043 TCEAL5Q5H9L2 206 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 PIK3AP1Q6ZUJ8 805 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 OXER1Q8TDS5 423 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 P2RX5Q93086 422 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 ATP6V0A4Q9HBG4 840 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 BRMS1Q9HCU9 246 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 GJB4Q9NTQ9 266 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 PLAGL2Q9UPG8 496 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 COL4A6Q14031 1691 aa14.33□□□□□ -0.12
PTPRF-214ENST00000496043 SIP14410 1827 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 TBX3O15119 743 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 SLC37A4O43826 429 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 STBD1O95210 358 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 BAG4O95429 457 aaKnown RBP14.32□□□□□ -0.12
PTPRF-214ENST00000496043 KCNA5P22460 613 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 KRT2P35908 639 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 DSC3Q14574 896 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 MTERF2Q49AM1 385 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 SCLT1Q96NL6 688 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 NECAB3Q96P71 396 aaPredicted RBP14.32□□□□□ -0.12
PTPRF-214ENST00000496043 ELAC1Q9H777 363 aaKnown RBP14.32□□□□□ -0.12
PTPRF-214ENST00000496043 ALG13Q9NP73 1137 aaKnown RBP14.32□□□□□ -0.12
PTPRF-214ENST00000496043 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 AAASQ9NRG9 546 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
PTPRF-214ENST00000496043 SEPT9Q9UHD8 586 aaPredicted RBP14.32□□□□□ -0.12
PTPRF-214ENST00000496043 MYH9P35579 1960 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 TBKBP1A7MCY6 615 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 EML1O00423 815 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 SEC24BO95487 1268 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 P4HBP07237 508 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 DARSP14868 501 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 GATMP50440 423 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 GPC3P51654 580 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 PUS10Q3MIT2 529 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 SPOUT1Q5T280 376 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 FAM102BQ5T8I3 360 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 EP400NLQ6ZTU2 488 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 SPPL3Q8TCT6 385 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 NLRP7Q8WX94 980 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 PABPC5Q96DU9 382 aaKnown RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 ZNF668Q96K58 619 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 JPH2Q9BR39 696 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 GCOM2Q9BZD3 368 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-214ENST00000496043 PCDHB12Q9Y5F1 795 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 EVPLQ92817 2033 aa14.31□□□□□ -0.12
PTPRF-214ENST00000496043 IGKV6-21A0A0C4DH24 114 aa14.3□□□□□ -0.12
PTPRF-214ENST00000496043 MAFO75444 373 aaPredicted RBP14.3□□□□□ -0.12
PTPRF-214ENST00000496043 LARGE1O95461 756 aa14.3□□□□□ -0.12
PTPRF-214ENST00000496043 MMP1P03956 469 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms