RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	OAT	P04181	439 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	CYP2C9	P11712	490 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	MARCKS	P29966	332 aa	Predicted RBP	13.33	□□□□□ -0.28
APTX-233	ENST00000496030	CYP4A11	Q02928	519 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	ECM1	Q16610	540 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	XKR3	Q5GH77	459 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	PPP2R2D	Q66LE6	453 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	OTOP2	Q7RTS6	562 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	SERINC5	Q86VE9	423 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	C4orf19	Q8IY42	314 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	ZNF579	Q8NAF0	562 aa	Known RBP	13.33	□□□□□ -0.28
APTX-233	ENST00000496030	BBX	Q8WY36	941 aa	Predicted RBP	13.33	□□□□□ -0.28
APTX-233	ENST00000496030	ATP6V0A1	Q93050	837 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	ZNF396	Q96N95	335 aa	Predicted RBP	13.33	□□□□□ -0.28
APTX-233	ENST00000496030	LXN	Q9BS40	222 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	CD320	Q9NPF0	282 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	CEP131	Q9UPN4	1083 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	MTCH2	Q9Y6C9	303 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	UMODL1	Q5DID0	1318 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	EVPL	Q92817	2033 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030		A0A087WWV3	80 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	RRN3P2	A6NIE6	340 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	RPA1	P27694	616 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	MRE11	P49959	708 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	NUCB2	P80303	420 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	TMEM266	Q2M3C6	531 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	ZNF484	Q5JVG2	852 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	ATL3	Q6DD88	541 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	USP49	Q70CQ1	688 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.32	□□□□□ -0.28
APTX-233	ENST00000496030	TPH2	Q8IWU9	490 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	NEK9	Q8TD19	979 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	FAM167A	Q96KS9	214 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	NOC4L	Q9BVI4	516 aa	Known RBP	13.32	□□□□□ -0.28
APTX-233	ENST00000496030	ZSWIM4	Q9H7M6	989 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	TUFT1	Q9NNX1	390 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	NRBP2	Q9NSY0	501 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	RCOR1	Q9UKL0	485 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	TRPC6	Q9Y210	931 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	SRPRB	Q9Y5M8	271 aa	Known RBP	13.32	□□□□□ -0.28
APTX-233	ENST00000496030	COL1A2	P08123	1366 aa		13.32	□□□□□ -0.28
APTX-233	ENST00000496030	EPOP	A6NHQ4	379 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	DDX11L8	A8MPP1	907 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	RBAK-RBAKDN	I3L0D1	243 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	TLR3	O15455	904 aa	Known RBP	13.31	□□□□□ -0.28
APTX-233	ENST00000496030	C22orf31	O95567	290 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	YEATS4	O95619	227 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	FGB	P02675	491 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	KLRC1	P26715	233 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	NPEPPS	P55786	919 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	IGBP1	P78318	339 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	RBL2	Q08999	1139 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	PTK7	Q13308	1070 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	TRAF7	Q6Q0C0	670 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	MTHFD1L	Q6UB35	978 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	RUFY4	Q6ZNE9	571 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	CKAP2L	Q8IYA6	745 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	LINC01465	Q8N7H1	131 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	VWCE	Q96DN2	955 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	CLIC6	Q96NY7	704 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	PNMA5	Q96PV4	448 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	SH2D3A	Q9BRG2	576 aa		13.31	□□□□□ -0.28
APTX-233	ENST00000496030	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.31	□□□□□ -0.28
APTX-233	ENST00000496030	SPTLC2	O15270	562 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	PPP6R2	O75170	966 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	GNAT1	P11488	350 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	XRCC6	P12956	609 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	YWHAB	P31946	246 aa	Known RBP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	LONP1	P36776	959 aa	Known RBP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	CCT6A	P40227	531 aa	Known RBP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	MKRN4P	Q13434	485 aa	Predicted RBP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	HYI	Q5T013	277 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	PLA2G4F	Q68DD2	849 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	POTEG	Q6S5H5	508 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	LRRC15	Q8TF66	581 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	AK8	Q96MA6	479 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	IPO9	Q96P70	1041 aa	Known RBP	13.3	□□□□□ -0.28
APTX-233	ENST00000496030	RAB34	Q9BZG1	259 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	CSRNP2	Q9H175	543 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	WNT8A	Q9H1J5	351 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	CERS4	Q9HA82	394 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	TUBE1	Q9UJT0	475 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	PCDHA2	Q9Y5H9	948 aa		13.3	□□□□□ -0.28
APTX-233	ENST00000496030	IGKV6-21	A0A0C4DH24	114 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	PI4K2B	G5E9Z4	385 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	DKC1	O60832	514 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
APTX-233	ENST00000496030	POU3F3	P20264	500 aa	Predicted RBP	13.29	□□□□□ -0.28
APTX-233	ENST00000496030	MUT	P22033	750 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	GRB10	Q13322	594 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	GPNMB	Q14956	572 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	STK38	Q15208	465 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	SPECC1	Q5M775	1068 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	KCNK18	Q7Z418	384 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	RPAIN	Q86UA6	219 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	KIAA0319L	Q8IZA0	1049 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	KRI1	Q8N9T8	703 aa	Known RBP	13.29	□□□□□ -0.28
APTX-233	ENST00000496030	ERMN	Q8TAM6	284 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	SNX29	Q8TEQ0	813 aa		13.29	□□□□□ -0.28
APTX-233	ENST00000496030	PIGO	Q8TEQ8	1089 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms