RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CNOT6LQ96LI5 555 aaKnown RBP17.97■□□□□ 0.47
CBX4-204ENST00000495122 NACC1Q96RE7 527 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 UBE2OQ9C0C9 1292 aaKnown RBP17.97■□□□□ 0.47
CBX4-204ENST00000495122 TBC1D22BQ9NU19 505 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 TAB2Q9NYJ8 693 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 SEL1LQ9UBV2 794 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 R3HCC1Q9Y3T6 440 aaKnown RBP17.97■□□□□ 0.47
CBX4-204ENST00000495122 COL6A3P12111 3177 aa17.97■□□□□ 0.47
CBX4-204ENST00000495122 IPO5O00410 1097 aaKnown RBP17.96■□□□□ 0.47
CBX4-204ENST00000495122 MAFGO15525 162 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 STAM2O75886 525 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
CBX4-204ENST00000495122 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
CBX4-204ENST00000495122 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
CBX4-204ENST00000495122 TNNT1P13805 278 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 ADCYAP1R1P41586 468 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 UBXN1Q04323 297 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 EDRF1Q3B7T1 1238 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 FKBP15Q5T1M5 1219 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
CBX4-204ENST00000495122 POTEGQ6S5H5 508 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 RDM1Q8NG50 284 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
CBX4-204ENST00000495122 TUBGCP2Q9BSJ2 902 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 SEMA6BQ9H3T3 888 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 JADE2Q9NQC1 790 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 ATP11BQ9Y2G3 1177 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 PCDHA2Q9Y5H9 948 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
CBX4-204ENST00000495122 UBE4BO95155 1302 aa17.96■□□□□ 0.46
CBX4-204ENST00000495122 NFIBO00712 420 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 ADAMTS4O75173 837 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 PGK1P00558 417 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 MARSP56192 900 aaKnown RBP17.95■□□□□ 0.46
CBX4-204ENST00000495122 FKBP3Q00688 224 aaKnown RBP17.95■□□□□ 0.46
CBX4-204ENST00000495122 BMT2Q1RMZ1 405 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 LRIT3Q3SXY7 679 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 TRIM60Q495X7 471 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 ZCWPW2Q504Y3 356 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 C1orf53Q5VUE5 145 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 TMTC1Q8IUR5 882 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 ZC3H3Q8IXZ2 948 aaKnown RBP17.95■□□□□ 0.46
CBX4-204ENST00000495122 ANKRD35Q8N283 1001 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 MYRIPQ8NFW9 859 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 GJA10Q969M2 543 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 ERGIC2Q96RQ1 377 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 VPS16Q9H269 839 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 ACAD9Q9H845 621 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 OLFML3Q9NRN5 406 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
CBX4-204ENST00000495122 TBCAO75347 108 aaKnown RBP17.94■□□□□ 0.46
CBX4-204ENST00000495122 LYPLA2O95372 231 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 GTF2F1P35269 517 aaKnown RBP eCLIP17.94■□□□□ 0.462e-9■■■□□ 16.5
CBX4-204ENST00000495122 MTIF2P46199 727 aaKnown RBP17.94■□□□□ 0.46
CBX4-204ENST00000495122 PPP2R3AQ06190 1150 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 RBL2Q08999 1139 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 GIT2Q14161 759 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 MAN2A1Q16706 1144 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 ARSHQ5FYA8 562 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 HERC4Q5GLZ8 1057 aaPredicted RBP17.94■□□□□ 0.46
CBX4-204ENST00000495122 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 RNF180Q86T96 592 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 CYP2W1Q8TAV3 490 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 PPP1R13BQ96KQ4 1090 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 RNF146Q9NTX7 359 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
CBX4-204ENST00000495122 TCEAL9Q9UHQ7 104 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 ODF2LQ9ULJ1 636 aa17.94■□□□□ 0.46
CBX4-204ENST00000495122 A0A1W2PQJ5 194 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 EIF3DO15371 548 aaKnown RBP eCLIP17.93■□□□□ 0.46
CBX4-204ENST00000495122 GYPCP04921 128 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 RPS6P62753 249 aaKnown RBP17.93■□□□□ 0.46
CBX4-204ENST00000495122 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 STXBP4Q6ZWJ1 553 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 GPRASP2Q96D09 838 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 C16orf45Q96MC5 204 aaPredicted RBP17.93■□□□□ 0.46
CBX4-204ENST00000495122 TIPINQ9BVW5 301 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 A1CFQ9NQ94 594 aaKnown RBP17.93■□□□□ 0.46
CBX4-204ENST00000495122 PDLIM7Q9NR12 457 aa17.93■□□□□ 0.46
CBX4-204ENST00000495122 ZHX1Q9UKY1 873 aaPredicted RBP17.93■□□□□ 0.46
CBX4-204ENST00000495122 A0A1W2PQ45 241 aaPredicted RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 A0A1W2PQY0 241 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 EML1O00423 815 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 ADCY6O43306 1168 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 SLITRK3O94933 977 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 ITGB5P18084 799 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 CCND2P30279 289 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 SFNP31947 248 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 JAK3P52333 1124 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 PGM5Q15124 567 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 GPR153Q6NV75 609 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 ARMCX2Q7L311 632 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms