RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 RFC5P40937 340 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 EPHB4P54760 987 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 NUCB2P80303 420 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 MGAT3Q09327 533 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 MBTPS1Q14703 1052 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 EMC2Q15006 297 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 ECM1Q16610 540 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 IER5Q5VY09 327 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
RFC2-211ENST00000494019 CABP7Q86V35 215 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 KIAA0319LQ8IZA0 1049 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
RFC2-211ENST00000494019 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 MTRQ99707 1265 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 JPH2Q9BR39 696 aaPredicted RBP11.28□□□□□ -0.6
RFC2-211ENST00000494019 MMTAG2Q9BU76 263 aaKnown RBP11.28□□□□□ -0.6
RFC2-211ENST00000494019 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 ANKEF1Q9NU02 776 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 GINS2Q9Y248 185 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 TRPV2Q9Y5S1 764 aa11.28□□□□□ -0.6
RFC2-211ENST00000494019 IGKV6-21A0A0C4DH24 114 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 ARHGEF35A5YM69 484 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 E9PMD0 336 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 USO1O60763 962 aaKnown RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 CHRNA1P02708 482 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 BMP8BP34820 402 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 UBA7P41226 1012 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 DNM2P50570 870 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 KRT85P78386 507 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 DRP2Q13474 957 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 FAM26DQ5JW98 314 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 EXOC8Q8IYI6 725 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 RPUSD2Q8IZ73 545 aaKnown RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 NME8Q8N427 588 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 CALML4Q96GE6 196 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 CLIC6Q96NY7 704 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 PLIN2Q99541 437 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.614e-6■■■■□ 21.9
RFC2-211ENST00000494019 NT5C3AQ9H0P0 336 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 BHMT2Q9H2M3 363 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 PRO3102Q9H379 93 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 DHX33Q9H6R0 707 aaKnown RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 CFAP45Q9UL16 551 aa11.27□□□□□ -0.61
RFC2-211ENST00000494019 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 SRPRBQ9Y5M8 271 aaKnown RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 MORC2Q9Y6X9 1032 aaPredicted RBP11.27□□□□□ -0.61
RFC2-211ENST00000494019 NLRC5Q86WI3 1866 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 GAS2O43903 313 aaKnown RBP11.26□□□□□ -0.61
RFC2-211ENST00000494019 PPP6R2O75170 966 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 DGAT1O75907 488 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 GHRP10912 638 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 XRCC6P12956 609 aaKnown RBP eCLIP11.26□□□□□ -0.61
RFC2-211ENST00000494019 TXLNAP40222 546 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 GRB10Q13322 594 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 GPNMBQ14956 572 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 KARSQ15046 597 aaKnown RBP11.26□□□□□ -0.61
RFC2-211ENST00000494019 SHHQ15465 462 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 KIZQ2M2Z5 673 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 TMEM119Q4V9L6 283 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 HYIQ5T013 277 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 ZNF365Q70YC5 407 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 TCP11Q8WWU5 503 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
RFC2-211ENST00000494019 TMEM143Q96AN5 459 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 ZNF668Q96K58 619 aaPredicted RBP11.26□□□□□ -0.61
RFC2-211ENST00000494019 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
RFC2-211ENST00000494019 PNMA5Q96PV4 448 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 OSMRQ99650 979 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
RFC2-211ENST00000494019 OSBPL7Q9BZF2 842 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 DNM3Q9UQ16 869 aa11.26□□□□□ -0.61
RFC2-211ENST00000494019 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 SLC26A4O43511 780 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 EYA4O95677 639 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 FGBP02675 491 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 CXCL10P02778 98 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 ACTN1P12814 892 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 ME1P48163 572 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 GPC3P51654 580 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 LPIN1Q14693 890 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms