RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TREHO43280 583 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 SLC26A4O43511 780 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 DKC1O60832 514 aaKnown RBP eCLIP14.97□□□□□ -0.01
MSH6-208ENST00000493177 SLITRK3O94933 977 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 ATG7O95352 703 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 MBD3O95983 291 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 CTSHP09668 335 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 FOSL2P15408 326 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 PLCG1P19174 1290 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 PBX2P40425 430 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 QARSP47897 775 aaKnown RBP14.97□□□□□ -0.01
MSH6-208ENST00000493177 PSMC5P62195 406 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 FAM160A1Q05DH4 1040 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 PPFIA1Q13136 1202 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 GRB10Q13322 594 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 ECM1Q16610 540 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 ZNF618Q5T7W0 954 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 PDXDC2PQ6P474 469 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 CNKSR3Q6P9H4 555 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 POTEGQ6S5H5 508 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 TRMT1LQ7Z2T5 733 aaKnown RBP14.97□□□□□ -0.01
MSH6-208ENST00000493177 CCDC60Q8IWA6 550 aaPredicted RBP14.97□□□□□ -0.01
MSH6-208ENST00000493177 CKAP2LQ8IYA6 745 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 TET1Q8NFU7 2136 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 MYLIPQ8WY64 445 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 GUCD1Q96NT3 240 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 PNMA5Q96PV4 448 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 SLC9A7Q96T83 725 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 CDX2Q99626 313 aaPredicted RBP14.97□□□□□ -0.01
MSH6-208ENST00000493177 HSD17B14Q9BPX1 270 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 NKX2-4Q9H2Z4 354 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 TTYH1Q9H313 450 aaPredicted RBP14.97□□□□□ -0.01
MSH6-208ENST00000493177 ZNF576Q9H609 170 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 ZSWIM4Q9H7M6 989 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 SLC28A3Q9HAS3 691 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 DDX19AQ9NUU7 478 aaKnown RBP14.97□□□□□ -0.01
MSH6-208ENST00000493177 TRPC6Q9Y210 931 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 HPSEQ9Y251 543 aa14.97□□□□□ -0.01
MSH6-208ENST00000493177 EMSYQ7Z589 1322 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 NRCAMQ92823 1304 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 A0A087X0B3 334 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 FAM237AA0A1B0GTK4 181 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 RSPH10B2B2RC85 870 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 KINO60870 393 aaKnown RBP14.96□□□□□ -0.01
MSH6-208ENST00000493177 BAIAP3O94812 1187 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 RSPH10BP0C881 870 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 STAT5BP51692 787 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 RABGGTBP53611 331 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 IGBP1P78318 339 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 RBL2Q08999 1139 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 UGCGQ16739 394 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 TMEM119Q4V9L6 283 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 RSPH3Q86UC2 560 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 SERINC5Q86VE9 423 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 CEP57L1Q8IYX8 460 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 IQUBQ8NA54 791 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 GPT2Q8TD30 523 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 CTAGE1Q96RT6 745 aa14.96□□□□□ -0.01
MSH6-208ENST00000493177 GAS2L1Q99501 681 aaPredicted RBP14.96□□□□□ -0.01
MSH6-208ENST00000493177 A0A087WWV3 80 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 NR1I2O75469 434 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 ZNF202O95125 648 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 SSBP05455 408 aaKnown RBP eCLIP14.95□□□□□ -0.02
MSH6-208ENST00000493177 MUTP22033 750 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 IKBKEQ14164 716 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 HIC1Q14526 733 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 DHX8Q14562 1220 aaKnown RBP14.95□□□□□ -0.02
MSH6-208ENST00000493177 GRIK4Q16099 956 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 HYIQ5T013 277 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 PPP2R2DQ66LE6 453 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 FMR1NBQ8N0W7 255 aaPredicted RBP14.95□□□□□ -0.02
MSH6-208ENST00000493177 CNNM3Q8NE01 707 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 LMBR1Q8WVP7 490 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 WNT8BQ93098 351 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 CCDC43Q96MW1 224 aaKnown RBP14.95□□□□□ -0.02
MSH6-208ENST00000493177 NACC1Q96RE7 527 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 PCYT2Q99447 389 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 ZBED2Q9BTP6 218 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 SERTAD1Q9UHV2 236 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 DNM3Q9UQ16 869 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 PTPRSQ13332 1948 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 MICAL3Q7RTP6 2002 aa14.95□□□□□ -0.02
MSH6-208ENST00000493177 IGSF9BQ9UPX0 1349 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 WDR81Q562E7 1941 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 IGKV6D-21A0A0A0MT36 114 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.94□□□□□ -0.02
MSH6-208ENST00000493177 E9PMD0 336 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 NBNO60934 754 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 CAND2O75155 1236 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 LGR5O75473 907 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 PRKCEQ02156 737 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 SNW1Q13573 536 aaKnown RBP14.94□□□□□ -0.02
MSH6-208ENST00000493177 TRIM71Q2Q1W2 868 aaKnown RBP14.94□□□□□ -0.02
MSH6-208ENST00000493177 LONRF3Q496Y0 759 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 C4orf19Q8IY42 314 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 ENGASEQ8NFI3 743 aa14.94□□□□□ -0.02
MSH6-208ENST00000493177 PIGOQ8TEQ8 1089 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms