RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SLC37A4O43826 429 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 DKC1O60832 514 aaKnown RBP eCLIP12.93□□□□□ -0.34
LRTM1-202ENST00000493075 STBD1O95210 358 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 SARSP49591 514 aaKnown RBP12.93□□□□□ -0.34
LRTM1-202ENST00000493075 FAM189BP81408 668 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 PPP2R5CQ13362 524 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 BTG3Q14201 252 aaPredicted RBP12.93□□□□□ -0.34
LRTM1-202ENST00000493075 UGCGQ16739 394 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 KIZQ2M2Z5 673 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 TMEM266Q2M3C6 531 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 TRMT1LQ7Z2T5 733 aaKnown RBP12.93□□□□□ -0.34
LRTM1-202ENST00000493075 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
LRTM1-202ENST00000493075 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
LRTM1-202ENST00000493075 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 LMAN2LQ9H0V9 348 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 ADAMTS10Q9H324 1103 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
LRTM1-202ENST00000493075 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.92□□□□□ -0.34
LRTM1-202ENST00000493075 IGKV6-21A0A0C4DH24 114 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
LRTM1-202ENST00000493075 LARGE1O95461 756 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 VTNP04004 478 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
LRTM1-202ENST00000493075 KRT2P35908 639 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 CLCN3P51790 818 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
LRTM1-202ENST00000493075 PSMC5P62195 406 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 PLCB2Q00722 1185 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 TBC1D8BQ0IIM8 1120 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 TIGD5Q53EQ6 642 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 NAALADL2Q58DX5 795 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 SLC24A5Q71RS6 500 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 FAM228AQ86W67 206 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 OSMRQ99650 979 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 ADAM2Q99965 735 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
LRTM1-202ENST00000493075 ELAC1Q9H777 363 aaKnown RBP12.92□□□□□ -0.34
LRTM1-202ENST00000493075 VAV3Q9UKW4 847 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 LIMCH1Q9UPQ0 1083 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 PCDHB7Q9Y5E2 793 aa12.92□□□□□ -0.34
LRTM1-202ENST00000493075 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 C9IYK1 514 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 TNFRSF10AO00220 468 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 MGEA5O60502 916 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
LRTM1-202ENST00000493075 P4HBP07237 508 aaKnown RBP12.91□□□□□ -0.34
LRTM1-202ENST00000493075 CTNNB1P35222 781 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 QARSP47897 775 aaKnown RBP12.91□□□□□ -0.34
LRTM1-202ENST00000493075 TFF2Q03403 129 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 DSC3Q14574 896 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 SLFN12Q8IYM2 578 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 ADAMTS19Q8TE59 1207 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 HAS1Q92839 578 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 P2RX5Q93086 422 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
LRTM1-202ENST00000493075 PPME1Q9Y570 386 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 TRANK1O15050 2925 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 MICAL3Q7RTP6 2002 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
LRTM1-202ENST00000493075 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 EML1O00423 815 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 MARCH6O60337 910 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 MAFO75444 373 aaPredicted RBP12.9□□□□□ -0.34
LRTM1-202ENST00000493075 MMP1P03956 469 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 DNM2P50570 870 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 GPC3P51654 580 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 NR5A1Q13285 461 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 TRIM29Q14134 588 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 EPHA7Q15375 998 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 EARS2Q5JPH6 523 aaKnown RBP12.9□□□□□ -0.34
LRTM1-202ENST00000493075 ANO5Q75V66 913 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 EXOC8Q8IYI6 725 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
LRTM1-202ENST00000493075 TMEM161AQ9NX61 479 aa12.9□□□□□ -0.34
LRTM1-202ENST00000493075 SEPT9Q9UHD8 586 aaPredicted RBP12.9□□□□□ -0.34
LRTM1-202ENST00000493075 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 NCK2O43639 380 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 DTNBO60941 627 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 DARSP14868 501 aaKnown RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 COL19A1Q14993 1142 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 MTERF2Q49AM1 385 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 C4orf19Q8IY42 314 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 LLPHQ9BRT6 129 aaKnown RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 NSUN3Q9H649 340 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms