RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 LRRC37A2A6NM11 1700 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 RBAK-RBAKDNI3L0D1 243 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 PPFIA4O75335 1185 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 YEATS4O95619 227 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 PFKMP08237 780 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 ATP2A2P16615 1042 aaKnown RBP8.55□□□□□ -1.04
CLDN1-202ENST00000490800 MCCD1P59942 119 aaPredicted RBP8.55□□□□□ -1.04
CLDN1-202ENST00000490800 UBE2HP62256 183 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 ADGRE1Q14246 886 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 PTPAQ15257 358 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 SF3A1Q15459 793 aaKnown RBP8.55□□□□□ -1.04
CLDN1-202ENST00000490800 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 KCNV1Q6PIU1 500 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 USP38Q8NB14 1042 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 RASGRP4Q8TDF6 673 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
CLDN1-202ENST00000490800 PGBD1Q96JS3 809 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 GAS2L1Q99501 681 aaPredicted RBP8.55□□□□□ -1.04
CLDN1-202ENST00000490800 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 C6orf50Q9HD87 102 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 RIC8AQ9NPQ8 531 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 PCDHA6Q9UN73 950 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 PCDHA8Q9Y5H6 950 aa8.55□□□□□ -1.04
CLDN1-202ENST00000490800 HAS3O00219 553 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 WNT7AO00755 349 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 SPTLC2O15270 562 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 GGPS1O95749 300 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 MBD3O95983 291 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 ZNF286BP0CG31 522 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 TGFB3P10600 412 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 ACTN1P12814 892 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 IGFBP4P22692 258 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 GNA11P29992 359 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 CCND2P30279 289 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 RFC2P35250 354 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 ADCY7P51828 1080 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 MRPS9P82933 396 aaKnown RBP8.54□□□□□ -1.04
CLDN1-202ENST00000490800 SKOR1P84550 965 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 ZNF200P98182 395 aaPredicted RBP8.54□□□□□ -1.04
CLDN1-202ENST00000490800 GPNMBQ14956 572 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 STK38Q15208 465 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 CCDC85BQ15834 202 aaPredicted RBP8.54□□□□□ -1.04
CLDN1-202ENST00000490800 KIAA0753Q2KHM9 967 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 RILPL1Q5EBL4 403 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
CLDN1-202ENST00000490800 USP17L6PQ6QN14 398 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 PIK3AP1Q6ZUJ8 805 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 C7orf31Q8N865 590 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 BICD2Q8TD16 824 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 KCNG4Q8TDN1 519 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 DHX38Q92620 1227 aaKnown RBP8.54□□□□□ -1.04
CLDN1-202ENST00000490800 SPATA33Q96N06 139 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 C1QTNF2Q9BXJ5 285 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 PRDM6Q9NQX0 595 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 PCDHB6Q9Y5E3 794 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
CLDN1-202ENST00000490800 PRUNE2Q8WUY3 3088 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 CCDC194A0A1B0GVG4 234 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 RFXAPO00287 272 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 F2P00734 622 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 SELPP16109 830 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
CLDN1-202ENST00000490800 TRAPPC10P48553 1259 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 RAB15P59190 212 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 TTC38Q5R3I4 469 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 AXDND1Q5T1B0 1012 aaPredicted RBP8.53□□□□□ -1.04
CLDN1-202ENST00000490800 JAKMIP3Q5VZ66 844 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 REXO1Q8N1G1 1221 aaKnown RBP8.53□□□□□ -1.04
CLDN1-202ENST00000490800 CCDC155Q8N6L0 562 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 PLPP7Q8NBV4 271 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 CAGE1Q8TC20 777 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 AFAP1L1Q8TED9 768 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 C16orf70Q9BSU1 422 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 KATNAL1Q9BW62 490 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 CERS4Q9HA82 394 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 TMEM260Q9NX78 707 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 NOL7Q9UMY1 257 aaKnown RBP8.53□□□□□ -1.04
CLDN1-202ENST00000490800 PCDHA7Q9UN72 937 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 VCANP13611 3396 aa8.53□□□□□ -1.04
CLDN1-202ENST00000490800 SCN10AQ9Y5Y9 1956 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 MEIS2O14770 477 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 NBNO60934 754 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 PPP6R2O75170 966 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 CA3P07451 260 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 CKBP12277 381 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 HOXD8P13378 290 aaPredicted RBP8.52□□□□□ -1.05
CLDN1-202ENST00000490800 LIG1P18858 919 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 MARCKSP29966 332 aaPredicted RBP8.52□□□□□ -1.05
CLDN1-202ENST00000490800 ICAM3P32942 547 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 ME1P48163 572 aa8.52□□□□□ -1.05
CLDN1-202ENST00000490800 RPIAP49247 311 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms