RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, human

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOB-209	ENST00000488325	SARS	P49591	514 aa	Known RBP	13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ZNF165	P49910	485 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MRPS9	P82933	396 aa	Known RBP	13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SPIRE1	Q08AE8	756 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	DPYD	Q12882	1025 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MTMR1	Q13613	665 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	KCTD2	Q14681	263 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GNPTAB	Q3T906	1256 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	NAALADL2	Q58DX5	795 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SV2B	Q7L1I2	683 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SPRED2	Q7Z698	418 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GRAMD1C	Q8IYS0	662 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	NEK9	Q8TD19	979 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ERCC4	Q92889	916 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SCLY	Q96I15	445 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PLIN2	Q99541	437 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	DNAJC25	Q9H1X3	360 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	AGO4	Q9HCK5	861 aa	Known RBP	13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	TBC1D22B	Q9NU19	505 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	KBTBD4	Q9NVX7	518 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MAN1B1	Q9UKM7	699 aa		13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	LOC102724159	A0A0B4J2E5	919 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GRXCR2	A6NFK2	248 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	BIN1	O00499	593 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	RPA1	P27694	616 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PWP2	Q15269	919 aa	Known RBP	13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GNAS	Q5JWF2	1037 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SPATA20	Q8TB22	786 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	LARP4B	Q92615	738 aa	Known RBP	13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	RAD54L	Q92698	747 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GJA10	Q969M2	543 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PNMA5	Q96PV4	448 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	BPIFA3	Q9BQP9	254 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	UPF3A	Q9H1J1	476 aa	Known RBP	13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SPC25	Q9HBM1	224 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	TUFT1	Q9NNX1	390 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	KCNH7	Q9NS40	1196 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	LMCD1	Q9NZU5	365 aa		13.43	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PTPRZ1	P23471	2315 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	BECN2	A8MW95	431 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GOLGA6L19	H0YKK7	550 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ADCY6	O43306	1168 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SNAI1	O95863	264 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	XRCC6	P12956	609 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ALDH5A1	P51649	535 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GJA9	P57773	515 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	TPM4	P67936	248 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	EPHA7	Q15375	998 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	STXBP2	Q15833	593 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MLKL	Q8NB16	471 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SLC43A3	Q8NBI5	491 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	GDPD5	Q8WTR4	605 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	INPP4A	Q96PE3	977 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SLC9A7	Q96T83	725 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	C7orf25	Q9BPX7	421 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CBX8	Q9HC52	389 aa		13.42	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SMTNL1	A8MU46	457 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	EIF3J	O75822	258 aa	Known RBP	13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	RPN1	P04843	607 aa	Known RBP	13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PFKM	P08237	780 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PDE4D	Q08499	809 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MORC3	Q14149	939 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	KCNB1	Q14721	858 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	DPCR1	Q3MIW9	517 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	IER5L	Q5T953	404 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MIER3	Q7Z3K6	550 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MSL3	Q8N5Y2	521 aa	Known RBP	13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	FAM133A	Q8N9E0	248 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	RDM1	Q8NG50	284 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	STAM	Q92783	540 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PURB	Q96QR8	312 aa	Known RBP	13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	TRPV6	Q9H1D0	765 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	BLZF1	Q9H2G9	400 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	UNC45A	Q9H3U1	944 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	BLOC1S4	Q9NUP1	217 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	DNM3	Q9UQ16	869 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CACNA1B	Q00975	2339 aa		13.41	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CHMP2A	O43633	222 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MED24	O75448	989 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	SFN	P31947	248 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	JAK3	P52333	1124 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ASIC1	P78348	528 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	KRT76	Q01546	638 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CUL4B	Q13620	913 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MCM6	Q14566	821 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CNNM4	Q6P4Q7	775 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	B3GNT9	Q6UX72	402 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	CXCL17	Q6UXB2	119 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ERMP1	Q7Z2K6	904 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	DEFB128	Q7Z7B8	93 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	HERC6	Q8IVU3	1022 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	PHOSPHO2	Q8TCD6	241 aa		13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	ZFP91	Q96JP5	570 aa	Predicted RBP	13.4	□□□□□ -0.26
HLA-DOB-209	ENST00000488325	MTR	Q99707	1265 aa		13.4	□□□□□ -0.26

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