RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 MAMDC2Q7Z304 686 aaPredicted RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCGF5Q86SE9 256 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 CMTR2Q8IYT2 770 aaKnown RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 CPXCR1Q8N123 301 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 IGSF22Q8N9C0 903 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 CLRN3Q8NCR9 226 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 FRS2Q8WU20 508 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 CHTF18Q8WVB6 975 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 KCTD13Q8WZ19 329 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 GJA10Q969M2 543 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 HSPBAP1Q96EW2 488 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 MAN1C1Q9NR34 630 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 C14orf119Q9NWQ9 140 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 FNIP2Q9P278 1114 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 IPPQ9Y573 584 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGA9Q9Y5G4 932 aaKnown RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGA8Q9Y5G5 932 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGA7Q9Y5G6 932 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGA6Q9Y5G7 932 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGA3Q9Y5H0 932 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGA2Q9Y5H1 932 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 BACE2Q9Y5Z0 518 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 C2orf71A6NGG8 1288 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 B4E1Z4 1266 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 TRAF5O00463 557 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SLC26A4O43511 780 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SNRPB2P08579 225 aaKnown RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 DBHP09172 617 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SRGNP10124 158 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 ATF2P15336 505 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 ECI1P42126 302 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 ECE1P42892 770 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SEPHS1P49903 392 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 GUCY1A3Q02108 690 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 MAP4K2Q12851 820 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SIM2Q14190 667 aaPredicted RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 MAPRE1Q15691 268 aaKnown RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 DPY19L1Q2PZI1 675 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 TMEM240Q5SV17 173 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 GPR158Q5T848 1215 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SRLQ86TD4 932 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 SAPCD2Q86UD0 394 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 CCDC140Q96MF4 163 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 ORAI3Q9BRQ5 295 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 NAA15Q9BXJ9 866 aaKnown RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 ZHX3Q9H4I2 956 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 DDX21Q9NR30 783 aaKnown RBP eCLIP4.45□□□□□ -1.76e-18■■■■■ 61.7
HFM1-208ENST00000488023 NRBP1Q9UHY1 535 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 DMTF1Q9Y222 760 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 COQ6Q9Y2Z9 468 aa4.45□□□□□ -1.7
HFM1-208ENST00000488023 MORC2Q9Y6X9 1032 aaPredicted RBP4.45□□□□□ -1.7
HFM1-208ENST00000488023 SH3D21A4FU49 640 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 CFAP69A5D8W1 941 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 A6NNZ2 444 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 C1QTNF3-AMACRE9PGA6 284 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 STXBP3O00186 592 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 ERC2O15083 957 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 IL33O95760 270 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 THBDP07204 575 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 FAM163BP0C2L3 166 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 PAMP19021 973 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 USP14P54578 494 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 SETQ01105 290 aaPredicted RBP4.44□□□□□ -1.7
HFM1-208ENST00000488023 ADCY1Q08828 1119 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 SCRN1Q12765 414 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 DDX53Q86TM3 631 aaKnown RBP4.44□□□□□ -1.7
HFM1-208ENST00000488023 KIF18BQ86Y91 864 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 CCDC103Q8IW40 242 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 SMAP1Q8IYB5 467 aaPredicted RBP4.44□□□□□ -1.7
HFM1-208ENST00000488023 IFNL2Q8IZJ0 200 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 TTC17Q96AE7 1141 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 RUNDC1Q96C34 613 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 AIFM3Q96NN9 605 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 MTA3Q9BTC8 594 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 GPRC5CQ9NQ84 441 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 KLHL11Q9NVR0 708 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 H2AFY2Q9P0M6 372 aaPredicted RBP4.44□□□□□ -1.7
HFM1-208ENST00000488023 TMEFF2Q9UIK5 374 aaPredicted RBP4.44□□□□□ -1.7
HFM1-208ENST00000488023 PLA2G2DQ9UNK4 145 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 DNM3Q9UQ16 869 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 NPFFR2Q9Y5X5 522 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 HCFC2Q9Y5Z7 792 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 DUSP10Q9Y6W6 482 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 PMF1-BGLAPU3KQ54 211 aa4.44□□□□□ -1.7
HFM1-208ENST00000488023 XPOTO43592 962 aaKnown RBP4.43□□□□□ -1.7
HFM1-208ENST00000488023 GAS7O60861 476 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 H2AFYO75367 372 aaKnown RBP4.43□□□□□ -1.7
HFM1-208ENST00000488023 ITGB3P05106 788 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 RBP3P10745 1247 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 ATP2A2P16615 1042 aaKnown RBP4.43□□□□□ -1.7
HFM1-208ENST00000488023 LSSP48449 732 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 ZNF267Q14586 743 aaPredicted RBP4.43□□□□□ -1.7
HFM1-208ENST00000488023 SLC4A8Q2Y0W8 1093 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 EFCAB2Q5VUJ9 269 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 STYK1Q6J9G0 422 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 B3GNT9Q6UX72 402 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 CABP7Q86V35 215 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 HERPUD2Q9BSE4 406 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 PAGR1Q9BTK6 254 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 NLRC4Q9NPP4 1024 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms