RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 C16orf70Q9BSU1 422 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 DSCC1Q9BVC3 393 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 RNPEPQ9H4A4 650 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 C11orf16Q9NQ32 467 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 PRKAG3Q9UGI9 489 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 RWDD3Q9Y3V2 267 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 RALGAPA2Q2PPJ7 1873 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 DOCK5Q9H7D0 1870 aa6.43□□□□□ -1.38
MACF1-221ENST00000487656 MYO7AQ13402 2215 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 PNMA6FA0A0J9YX94 578 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 ERICH2A1L162 156 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 FAM187AA6NFU0 413 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 CDK2AP1O14519 115 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 OPLAHO14841 1288 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 TREHO43280 583 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 DCXO43602 365 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 LGALS2P05162 132 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 RB1P06400 928 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 SMIM10L2AP0DMW4 78 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 SMIM10L2BP0DMW5 78 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 IL9P15248 144 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 UBA1P22314 1058 aaKnown RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 EPHA4P54764 986 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 RRP1P56182 461 aaKnown RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 CENPCQ03188 943 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 RSPH3Q86UC2 560 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 CHD1LQ86WJ1 897 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 FIBCD1Q8N539 461 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 GIMAP8Q8ND71 665 aaPredicted RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 CUL5Q93034 780 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 WNT8BQ93098 351 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 MTMR8Q96EF0 704 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 IFIH1Q9BYX4 1025 aaKnown RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 LMAN2LQ9H0V9 348 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 TSPAN10Q9H1Z9 355 aaPredicted RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 KCNH6Q9H252 994 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 NSUN3Q9H649 340 aaKnown RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 RIOX1Q9H6W3 641 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 SETD4Q9NVD3 440 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 SCHIP1Q9P0W5 487 aaPredicted RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 MAD2L2Q9UI95 211 aa6.42□□□□□ -1.38
MACF1-221ENST00000487656 ZNF215Q9UL58 517 aaPredicted RBP6.42□□□□□ -1.38
MACF1-221ENST00000487656 MUC6Q6W4X9 2439 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 XIRP2A4UGR9 3374 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 SPATA31C2B4DYI2 1134 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 H3BQ06 376 aaPredicted RBP6.41□□□□□ -1.38
MACF1-221ENST00000487656 FIBPO43427 364 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 CTSHP09668 335 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 HOXC8P31273 242 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 ICAM3P32942 547 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 BMPR1AP36894 532 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 ARHGAP4P98171 946 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 SART3Q15020 963 aaKnown RBP6.41□□□□□ -1.38
MACF1-221ENST00000487656 TCEAL5Q5H9L2 206 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 FAM26DQ5JW98 314 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 XRRA1Q6P2D8 792 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 METTL7BQ6UX53 244 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 CYFIP1Q7L576 1253 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 ALYREFQ86V81 257 aaKnown RBP6.41□□□□□ -1.38
MACF1-221ENST00000487656 SLC9A9Q8IVB4 645 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 ADHFE1Q8IWW8 467 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 SMC5Q8IY18 1101 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 TNPO1Q92973 898 aaKnown RBP6.41□□□□□ -1.38
MACF1-221ENST00000487656 PPP2R3CQ969Q6 453 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 PIGSQ96S52 555 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 POP1Q99575 1024 aaKnown RBP6.41□□□□□ -1.38
MACF1-221ENST00000487656 SENP7Q9BQF6 1050 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 C11orf84Q9BUA3 381 aaPredicted RBP6.41□□□□□ -1.38
MACF1-221ENST00000487656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.41□□□□□ -1.383e-6■■■■■ 28.8
MACF1-221ENST00000487656 CLDND1Q9NY35 253 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 NRCAMQ92823 1304 aa6.41□□□□□ -1.38
MACF1-221ENST00000487656 TTC3P53804 2025 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 C5orf67F2Z3F1 127 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 IFIT3O14879 490 aaKnown RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 PPP1R11O60927 126 aaPredicted RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 RPLP2P05387 115 aaKnown RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 CTNNB1P35222 781 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 SCNN1AP37088 669 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 PSMA6P60900 246 aaKnown RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 MRPS9P82933 396 aaKnown RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 FOXK2Q01167 660 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 NUCB1Q02818 461 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 ZP2Q05996 745 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 GRM4Q14833 912 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 SEC23AQ15436 765 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 TBCELQ5QJ74 424 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 UTP14CQ5TAP6 766 aaKnown RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 TMCO4Q5TGY1 634 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 TAF2Q6P1X5 1199 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 CATIPQ7Z7H3 387 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 RALYLQ86SE5 291 aaKnown RBP6.4□□□□□ -1.38
MACF1-221ENST00000487656 RPAINQ86UA6 219 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 NLRX1Q86UT6 975 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 IL31RAQ8NI17 732 aa6.4□□□□□ -1.38
MACF1-221ENST00000487656 SMARCC2Q8TAQ2 1214 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms