RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 MCUR1Q96AQ8 359 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 C7orf25Q9BPX7 421 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ERP44Q9BS26 406 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 GREM2Q9H772 168 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PIDD1Q9HB75 910 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 RIC8AQ9NPQ8 531 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 CYP39A1Q9NYL5 469 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 LARSQ9P2J5 1176 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ARMCX3Q9UH62 379 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 USH1CQ9Y6N9 552 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 LMO7Q8WWI1 1683 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 CYP2D7A0A087X1C5 515 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ATF3P18847 181 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 STRN3Q13033 797 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 MKRN3Q13064 507 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ADAM9Q13443 819 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SLC4A8Q2Y0W8 1093 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 FAM47AQ5JRC9 791 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 KRT79Q5XKE5 535 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 HGSNATQ68CP4 663 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 IRGCQ6NXR0 463 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ARHGEF18Q6ZSZ5 1173 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SEPT14Q6ZU15 432 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 DNAAF5Q86Y56 855 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 KIAA0895Q8NCT3 520 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 FBXO25Q8TCJ0 367 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 UBA5Q9GZZ9 404 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ARHGEF3Q9NR81 526 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 TRMT112Q9UI30 125 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 BZW2Q9Y6E2 419 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ATRNO75882 1429 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 NBPF26B4DH59 902 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 GNA14O95837 355 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 GSTA2P09210 222 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 NUDT17P0C025 328 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 BRAFP15056 766 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 IL9RQ01113 521 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 NONOQ15233 471 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 LONRF1Q17RB8 773 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SPDYCQ5MJ68 293 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 CENPPQ6IPU0 288 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 MTHFD1LQ6UB35 978 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 NBPF15Q8N660 670 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 TPCN2Q8NHX9 752 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SNX29Q8TEQ0 813 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ZFAND2BQ8WV99 257 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 LARP4BQ92615 738 aaKnown RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 GLG1Q92896 1179 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 TNFRSF25Q93038 417 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 BICD1Q96G01 975 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 LRRC37BQ96QE4 947 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 LBHD1Q9BQE6 289 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 CCDC77Q9BR77 488 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 MTUS1Q9ULD2 1270 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ABCB11O95342 1321 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 RBAK-RBAKDNI3L0D1 243 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 MAPK13O15264 365 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 MAP3K7O43318 606 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 LGR5O75473 907 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 VHLP40337 213 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 KCNMA1Q12791 1236 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 RASGRF1Q13972 1273 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SEC23AQ15436 765 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 CLUL1Q15846 466 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ASTE1Q2TB18 679 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 FAM26FQ5R3K3 315 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 VPS52Q8N1B4 723 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SHISA4Q96DD7 197 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 RBM41Q96IZ5 413 aaKnown RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 TRAPPC9Q96Q05 1148 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 TMEM237Q96Q45 408 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SEMA4AQ9H3S1 761 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 WDR35Q9P2L0 1181 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ASIC3Q9UHC3 531 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 TBK1Q9UHD2 729 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 HAO1Q9UJM8 370 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 PTPN22Q9Y2R2 807 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ALS2Q96Q42 1657 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 DCTN3O75935 186 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 UNC5CO95185 931 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 PYGBP11216 843 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ACADSP16219 412 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 DESP17661 470 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 GNAQP50148 359 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 CACNA2D1P54289 1103 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SH3BGRP55822 239 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 PTK2Q05397 1052 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ZBTB16Q05516 673 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 USP4Q13107 963 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 DHX34Q14147 1143 aaKnown RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 MAP7Q14244 749 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ZC3H12AQ5D1E8 599 aaKnown RBP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 SH2D4BQ5SQS7 431 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS13D-209ENST00000487188 KRT25Q7Z3Z0 450 aa6.73□□□□□ -1.33
VPS13D-209ENST00000487188 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms